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Record W2946172770 · doi:10.1134/s0003683819020108

Improving the Thermostability and pH Stability of Aspergillus niger Xylanase by Site-directed Mutagenesis

2019· article· en· W2946172770 on OpenAlexfundno aff
Qiang Li, Tao Wu, Yuting Duan, Jianjun Pei, Linguo Zhao

Bibliographic record

VenueApplied Biochemistry and Microbiology · 2019
Typearticle
Languageen
FieldEngineering
TopicBiofuel production and bioconversion
Canadian institutionsnot available
FundersNational Key Research and Development Program of ChinaGraduate Research and Innovation Projects of Jiangsu ProvincePriority Academic Program Development of Jiangsu Higher Education InstitutionsPetroleum Technology Research Centre
KeywordsThermostabilityAspergillus nigerXylanaseEnzymeChemistrySite-directed mutagenesisBiochemistryHomology modelingActive siteMutagenesisDirected evolutionAmino acidEnzyme assayMutationMutantGene

Abstract

fetched live from OpenAlex

Abstract To increase the thermostability and pH stability of the recombinant xylanase MxynB from the Aspergillus niger nl-1, site-directed mutagenesis method was selected by rational approaches based on the three-dimensional structures using a homology modeling of mxynB constructed by SWISS-MODEL and BLAST. The effect of disulphide in the structure of xylanase was studied to increase the optimum temperature and thermostability of enzyme, the variant MxynB-116-135 which was created with amino acid residues substitutions G116C+Y135C by site-directed mutagenesis had its reaction temperature for the maximum activity at 50oC, which corresponded to a basic 10oC unit increase compared with the wild-type enzyme. Moreover, the thermostability of A. niger nl-1 xylanase after mutation MxynB-G116C-Y135C-D76R-N28H-N29D-Y45M-N47L was clearly increased by 570% as compared with the wild-type enzyme under 70oC. In addition, the optimal activity pH of the enzyme after the mutations MxynB-G116C-Y135C-D76R-N28H-N29D-Y45M-N47L and MxynB-G116C-Y135C-S58H-D76R-N28H-N29D-Y45M-N47L raised from 4.5 to 6.0, meanwhile, the pH stabilities were increased from 120 to 194% compared with the wild-type enzyme under pH 5.0 to 7.0. All the results suggest that these amino acid residues are important in determining the thermostability and pH stability of MxynB from Aspergillus niger nl-1, which will raise its potential interest for the industrial applications.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.385

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.003
GPT teacher head0.157
Teacher spread0.154 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations12
Published2019
Admission routes1
Has abstractyes

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