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Record W2949397371 · doi:10.1371/journal.pone.0216697

Age at diagnosis, but not HPV type, is strongly associated with clinical course in recurrent respiratory papillomatosis

2019· article· en· W2949397371 on OpenAlexaff
Farrel J. Buchinsky, William L. Valentino, Nicole Ruszkay, Evan Powell, Craig S. Derkay, Riaz Y. Seedat, Virgilijus Uloza, Frederik G. Dikkers, David E. Tunkel, Sukgi S. Choi, Anthony J. Mortelliti, Paolo Campisi, Juan Camilo Ospina, Adam J. Donne, Robert T. Sataloff, Stephen F. Conley, John E. McClay, Ellen M. Friedman, Lisa M. Elden, Dale A. Tylor, Clark A. Rosen, Libby J. Smith, Graeme J. Copley, David E. Karas, John M. Schweinfurth, Charles M. Myer, Brian J. Wiatrak, Joseph E. Dohar, Steven E. Sobol, Robert W. Bastian, Richard J. Smith, Marshall E. Smith, Abebe M. Wassie, J. Christopher Post, Garth D. Ehrlich

Bibliographic record

VenuePLoS ONE · 2019
Typearticle
Languageen
FieldMedicine
TopicCervical Cancer and HPV Research
Canadian institutionsSickKids FoundationHospital for Sick ChildrenUniversity of Toronto
FundersRijksuniversiteit GroningenAllegheny Health NetworkCincinnati Children's Hospital Medical CenterNational Institute on Deafness and Other Communication DisordersState University of New York Upstate Medical UniversityCleveland ClinicSyracuse University
KeywordsRecurrent Respiratory PapillomatosisMedicineCohortPediatricsYoung adultDiseaseInternal medicine

Abstract

fetched live from OpenAlex

BACKGROUND: Recurrent Respiratory Papillomatosis (RRP) is a rare disease characterized by the growth of papillomas in the airway and especially the larynx. The clinical course is highly variable among individuals and there is poor understanding of the factors that drive an aggressive vs an indolent course. METHODS: A convenience cohort of 339 affected subjects with papillomas positive for only HPV6 or HPV11 and clinical course data available for 1 year or more, from a large multicenter international study were included. Exploratory data analysis was conducted followed by inferential analyses with frequentist and Bayesian statistics. RESULTS: We examined 339 subjects: 82% were diagnosed prior to the age of 18 years, 65% were infected with HPV6, and 69% had an aggressive clinical course. When comparing age at diagnosis with clinical course, the probability of aggressiveness is high for children under five years of age then drops rapidly. For patients diagnosed after the age of 10 years, an indolent course is more common. After accounting for confounding between HPV11 and young age, HPV type was minimally associated with aggressiveness. Fast and Frugal Trees (FFTs) were utilized to determine which algorithms yield the highest accuracy to classify patients as having an indolent or aggressive clinical course and consistently created a branch for diagnostic age at ~5 years old. There was no reliable strong association between clinical course and socioeconomic or parental factors. CONCLUSION: In the largest cohort of its type, we have identified a critical age at diagnosis which demarcates a more aggressive from less aggressive clinical course.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.008
Threshold uncertainty score0.992

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0090.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.151
GPT teacher head0.373
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations75
Published2019
Admission routes1
Has abstractyes

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Same venuePLoS ONESame topicCervical Cancer and HPV ResearchFrench-language works237,207