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Imaging the Role of Macrophage in Infection and Sterile Injury in Liver

2016· article· en· W2953727409 on OpenAlexaff
Paul Kubes, Zhutian Zeng, Craig N. Jenne

Bibliographic record

VenueThe FASEB Journal · 2016
Typearticle
Languageen
FieldImmunology and Microbiology
TopicImmune cells in cancer
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsMacrophageLiver injuryPathologyMedicineMicrobiologyBiologyInternal medicineGenetics

Abstract

fetched live from OpenAlex

In the liver, populations of resident macrophage and recruited monocytes play key roles in both the clearance of infection and tissue repair. Kupffer cells are liver macrophage that reside directly within the bloodstream, adherent to the sinusoid walls, ideally positioned to detect and capture pathogens. Using intravital microscopy (IVM), we are able to directly visualize Kupffer cells in the liver of live mice and to study how these cells bind, and clear bacteria from the bloodstream. IVM has revealed a number of unique aspects of pathogen recognition including antibody‐dependent, complement‐dependent and antibody/complement‐independent mechanisms of pathogen capture. The specific mechanism used by the Kupffer cell appears to vary according to the pathogen involved and these findings provide great insight into the development of vaccination strategies and new antibody‐based therapies designed to target specific pathogens. In contrast to infectious disease, tissue repair following sterile injury in the liver does not depend on the resident Kupffer cells, but rather, is dependent on the recruitment of inflammatory monocytes. Using IVM and mice with fluorescent reporter genes for various monocyte populations, we have identified that these recruited monocytes clear cellular debris from the site of injury and then transition, in situ , from classic CCR2 high (Cx3CR1 low ) monocytes to reparative Cx3CR1 high (CCR2 low ) alternative monocytes that support tissue repair and wound healing. This transition of CCR2 high cells to Cx3CR1 high monocytes is driven by the presence specific cytokines including IL‐4 and IL‐10. Failure to recruit to the initial CCR2 high cells or inhibition of the CCR2 high to Cx3CR1 high phenotype transition results in abnormal tissue repair including defects in collagen deposition and delayed wound healing.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.218
Teacher spread0.213 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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