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Record W2954256702 · doi:10.1038/s41598-019-45823-7

Genome-wide Association Study of Change in Fasting Glucose over time in 13,807 non-diabetic European Ancestry Individuals

2019· article· en· W2954256702 on OpenAlexaff
Ching‐Ti Liu, Jordi Merino, Denis Rybin, Daniel DiCorpo, Kelly S. Benke, Jennifer L. Bragg‐Gresham, Mickaël Canouil, Tanguy Corre, Harald Grallert, Aaron Isaacs, Zoltán Kutalik, Jari Lahti, Letizia Marullo, Carola Marzi, Laura J. Rasmussen‐Torvik, Ghislain Rocheleau, Rico Rueedi, Chiara Scapoli, Niek Verweij, Nicole Vogelzangs, Sara M. Willems, Loïc Yengo, Stephan J. L. Bakker, John Beilby, Jennie Hui, Eero Kajantie, Martina Müller‐Nurasyid, Wolfgang Rathmann, Beverley Balkau, Sven Bergmann, Johan G. Eriksson, José C. Florez, Philippe Froguel, Tamara Harris, Joseph Hung, Maryam Kavousi, Iva Miljkovic, Arthur W. Musk, Lyle J. Palmer, Annette Peters, Ronan Roussel, Pim van der Harst, Cornelia M. van Duijn, Péter Vollenweider, Inês Barroso, Inga Prokopenko, Josée Dupuis, James B. Meigs, Nabila Bouatia‐Naji

Bibliographic record

VenueScientific Reports · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic Associations and Epidemiology
Canadian institutionsMcGill University Health Centre
FundersU.S. National Library of MedicineNational Health and Medical Research CouncilSchool of Medicine, Boston UniversityEuropean CommissionNovartis PharmaFédération Française de CardiologieAssociation Diabète Risque VasculaireNovo Nordisk FondenChinese Society of Clinical OncologyHorizon 2020 Framework ProgrammeFondation de FranceNovo NordiskNederlandse Organisatie voor Wetenschappelijk OnderzoekZonMwNational Institutes of HealthU.S. Department of Health and Human ServicesH2020 Marie Skłodowska-Curie ActionsSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen ForschungErasmus Medisch CentrumHealthwayNational Institute of Diabetes and Digestive and Kidney DiseasesSanofiNational Science FoundationLes Laboratories Pierre FabreInstitut National de la Santé et de la Recherche MédicaleGlaxoSmithKlineEli Lilly and Company
KeywordsGenome-wide association studyAssociation (psychology)Fasting glucoseMedicineDiabetes mellitusGenetic associationBiologyDemographyBioinformaticsGeneticsEndocrinologySingle-nucleotide polymorphismGeneGenotypeInsulin resistancePsychology

Abstract

fetched live from OpenAlex

Abstract Type 2 diabetes (T2D) affects the health of millions of people worldwide. The identification of genetic determinants associated with changes in glycemia over time might illuminate biological features that precede the development of T2D. Here we conducted a genome-wide association study of longitudinal fasting glucose changes in up to 13,807 non-diabetic individuals of European descent from nine cohorts. Fasting glucose change over time was defined as the slope of the line defined by multiple fasting glucose measurements obtained over up to 14 years of observation. We tested for associations of genetic variants with inverse-normal transformed fasting glucose change over time adjusting for age at baseline, sex, and principal components of genetic variation. We found no genome-wide significant association (P < 5 × 10 −8 ) with fasting glucose change over time. Seven loci previously associated with T2D, fasting glucose or HbA1c were nominally (P < 0.05) associated with fasting glucose change over time. Limited power influences unambiguous interpretation, but these data suggest that genetic effects on fasting glucose change over time are likely to be small. A public version of the data provides a genomic resource to combine with future studies to evaluate shared genetic links with T2D and other metabolic risk traits.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.008
Threshold uncertainty score0.016

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.003
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.272
Teacher spread0.249 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2019
Admission routes1
Has abstractyes

Explore more

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