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Record W2954596857 · doi:10.1503/jpn.180036

The Canadian Biomarker Integration Network in Depression (CAN-BIND): magnetic resonance imaging protocols

2019· article· en· W2954596857 on OpenAlexaffvenueabout
Glenda MacQueen, Stefanie Hassel, Stephen R. Arnott, Jean Addington, Christopher R. Bowie, Signe Bray, Andrew D. Davis, Jonathan Downar, Jane A. Foster, Benício N. Frey, Benjamin I. Goldstein, Geoffrey B. Hall, Kate L. Harkness, Jacqueline K. Harris, Raymond W. Lam, Catherine Lebel, Roumen Milev, Daniel J. Müller, Sagar V. Parikh, Sakina J. Rizvi, Susan Rotzinger, Gulshan B. Sharma, Claudio N. Soares, Gustavo Turecki, Fidel Vila‐Rodriguez, Joanna Yu, Mojdeh Zamyadi, Stephen C. Strother, Sidney H. Kennedy

Bibliographic record

VenueJournal of Psychiatry and Neuroscience · 2019
Typearticle
Languageen
FieldNeuroscience
TopicFunctional Brain Connectivity Studies
Canadian institutionsMcMaster UniversitySt. Joseph’s Healthcare HamiltonMcGill UniversityBaycrest HospitalQueen's UniversityAlberta Children's HospitalDouglas Mental Health University InstituteKingston General HospitalChild, Adolescent and Family Mental HealthUniversity of CalgaryProvidence Health CareUniversity of AlbertaUniversity of British ColumbiaUniversity of TorontoHealth Sciences CentreUniversity Health NetworkVancouver Coastal HealthCentre for Addiction and Mental HealthSunnybrook Health Science CentreSt. Michael's Hospital
Fundersnot available
KeywordsNeuroimagingNeuropsychologyInformaticsBiomarkerDepression (economics)Functional magnetic resonance imagingModalitiesMagnetic resonance imagingMedicineCognitionPsychologyComputer scienceNeurosciencePsychiatryBiology

Abstract

fetched live from OpenAlex

Studies of clinical populations that combine MRI data generated at multiple sites are increasingly common. The Canadian Biomarker Integration Network in Depression (CAN-BIND; www.canbind.ca) is a national depression research program that includes multimodal neuroimaging collected at several sites across Canada. The purpose of the current paper is to provide detailed information on the imaging protocols used in a number of CAN-BIND studies. The CAN-BIND program implemented a series of platform-specific MRI protocols, including a suite of prescribed structural and functional MRI sequences supported by real-time monitoring for adherence and quality control. The imaging data are retained in an established informatics and databasing platform. Approximately 1300 participants are being recruited, including almost 1000 with depression. These include participants treated with antidepressant medications, transcranial magnetic stimulation, cognitive behavioural therapy and cognitive remediation therapy. Our ability to analyze the large number of imaging variables available may be limited by the sample size of the substudies. The CAN-BIND program includes a multimodal imaging database supported by extensive clinical, demographic, neuropsychological and biological data from people with major depression. It is a resource for Canadian investigators who are interested in understanding whether aspects of neuroimaging — alone or in combination with other variables — can predict the outcomes of various treatment modalities.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.079
Threshold uncertainty score0.994

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.278
Teacher spread0.256 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations58
Published2019
Admission routes3
Has abstractyes

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