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Record W2960171032 · doi:10.1016/j.dib.2019.104254

Transcriptomic data during seed maturation in dormant and non-dormant genotypes of wheat (Triticum aestivum L.)

2019· article· en· W2960171032 on OpenAlexafffund
Yuji Yamasaki, Mark C. Jordan, Belay T. Ayele

Bibliographic record

VenueData in Brief · 2019
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicSeed Germination and Physiology
Canadian institutionsAgriculture and Agri-Food CanadaUniversity of Manitoba
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsPreharvestBiologyDormancySproutingTranscriptomeGerminationSeed dormancyEndospermBotanyGeneGene expressionGeneticsPostharvest

Abstract

fetched live from OpenAlex

The present data profiles a large scale transcriptome changes in seed tissues (embryo and endosperm) during maturation in dormant and non-dormant genotypes of hexaploid wheat. Seed dormancy is an adaptive trait that has a significant influence on the incidence of preharvest sprouting, which is referred to as the germination of grains on the spike prior to harvest, in wheat. Given that preharvest sprouting causes a substantial yield and quality losses, elucidation of the molecular features that regulate seed dormancy has a paramount significance in the development of preharvest sprouting resistant wheat cultivars. The data presented here was produced from total RNA/mRNA samples isolated from developing seeds of dormant and non-dormant wheat genotypes using the Affymetrix GeneChip Wheat Genome Array. The raw and normalized formats of these data are available in Gene Expression Ominbus (GEO), NCBI's gene expression data repository, with accession number GSE83077.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.965
Threshold uncertainty score0.140

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.241
Teacher spread0.219 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2019
Admission routes2
Has abstractyes

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