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Record W2962044329 · doi:10.3389/fevo.2019.00261

The Pedological Context Modulates the Response of Soil Microbial Communities to Agroecological Management

2019· article· en· W2962044329 on OpenAlexfundno aff
Florine Degrune, Fanny Boeraeve, Marc Dufrêne, Jean‐Thomas Cornelis, Beat Frey, Martin Hartmann

Bibliographic record

VenueFrontiers in Ecology and Evolution · 2019
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicMycorrhizal Fungi and Plant Interactions
Canadian institutionsnot available
FundersSwiss Federal Institute for Forest, Snow and Landscape ResearchFonds De La Recherche Scientifique - FNRSGénome QuébecEidgenössische Technische Hochschule ZürichMcGill University
KeywordsContext (archaeology)AgroecosystemAgroecologyEcologyTillageAgroforestryEnvironmental scienceEnvironmental resource managementBiologyAgriculture

Abstract

fetched live from OpenAlex

Conservation agriculture is based on harnessing and optimizing natural ecological processes such as those mediated by the soil microbiota and represents a very promising approach to overcome the limitations of current conventional practices. Agronomic conservation strategies such as increasing plant diversity at field scale and minimizing soil disturbances such as tillage aim at fostering the presence of beneficial microbial communities to support intrinsic agroecosystem functions and reduce the reliance on agrochemicals and mechanical soil management. However, it remains poorly understood how these positive contributions are modulated by the pedological context. Moreover, only few studies have assessed the management-dependent responses of microbial communities in real-life farming systems. Here, in close association with the farmers and under realistic field conditions, we explored the response of bacterial and fungal community structure to conventional and conservation (using agroecological principles) management regimes across two pedological sites (loamy sand and sandy loam) in Belgium. Microbial diversity was assessed using a DNA metabarcoding approach of ribosomal markers with the Illumina MiSeq sequencing technology. Our results show that different management approaches select for distinct soil microbial communities and that these management-related effects were modulated by the pedological context. Therefore, designing new agricultural systems to foster the presence of beneficial organisms and reduce the level of pathogenic organisms should account for variability in the underlying pedological context.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.009
Threshold uncertainty score0.233

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.188
Teacher spread0.181 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations23
Published2019
Admission routes1
Has abstractyes

Explore more

Same venueFrontiers in Ecology and EvolutionSame topicMycorrhizal Fungi and Plant InteractionsFrench-language works237,207