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STROBE-MR: Guidelines for strengthening the reporting of Mendelian randomization studies

2019· preprint· en· W2962266952 on OpenAlexaff
George Davey Smith, Neil M Davies, Niki Dimou, Matthias Egger, V. Gallo, Robert Golub, Julian P. T. Higgins, Claudia Langenberg, Elizabeth Loder, J. Brent Richards, Rebecca C. Richmond, Veronika Skrivankova, Sonja A. Swanson, Nicholas J. Timpson, Anne Tybjærg‐Hansen, Tyler J. VanderWeele, Benjamin Woolf, James Yarmolinsky

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic Associations and Epidemiology
Canadian institutionsMcGill UniversityJewish General Hospital
FundersEconomic and Social Research Council
KeywordsStrengthening the reporting of observational studies in epidemiologyChecklistObservational studyQuality (philosophy)Consolidated Standards of Reporting TrialsSample (material)Sample size determinationPsychologyMedical physicsCritical appraisalMedical educationMedicineFamily medicineClinical trialAlternative medicineStatisticsPathologyMathematics

Abstract

fetched live from OpenAlex

While the number of studies using Mendelian randomization (MR) methods has grown exponentially in the last decade, the quality of reporting of these studies often has been poor. Similar to other reporting guidelines such as CONSORT ( Consolidated Standards of Reporting Trials ) for randomised trials and STROBE ( STrenghtening the Reporting of Observational studies in Epidemiology ) for observational studies in epidemiology, the STROBE-MR working group aims to provide guidance to authors on how to improve reporting of MR studies and help readers, reviewers, and journal editors to evaluate the quality of the presented evidence. Empirical evidence indicates that many reports of MR studies do not clearly state or examine the various assumptions of MR methods and report insufficient details on the data sources, which makes it hard to evaluate the quality and reliability of the results. The STROBE-MR guidance covers both one sample and two sample MR studies. At present, the draft checklist consists of 20 items, organized into the title and abstract, introduction, methods, results and discussion sections of articles. As these guidelines aim to reach the entire MR community, we would like to give everyone the opportunity to contribute their comments. The following draft of the STROBE-MR checklist is open for public discussion and all feedback will be taken into account during its next revision. For feedback, please use the comment section below this post on PeerJ Preprints. We hope the final guidelines will serve the entire community and contribute to improving the reporting of MR studies in the future.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.508
metaresearch head score (Gemma)0.773
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Reporting · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.492
Threshold uncertainty score0.607

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.5080.773
Meta-epidemiology (narrow)0.0060.008
Meta-epidemiology (broad)0.0120.018
Bibliometrics0.0340.029
Science and technology studies0.0050.011
Scholarly communication0.0170.010
Open science0.0130.014
Research integrity0.0150.023
Insufficient payload (model declined to judge)0.0570.041

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.141
GPT teacher head0.414
Teacher spread0.273 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designNot applicable
DomainReporting
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations104
Published2019
Admission routes1
Has abstractyes

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