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Record W2963618904 · doi:10.1016/j.nicl.2019.101954

Multi-study validation of data-driven disease progression models to characterize evolution of biomarkers in Alzheimer's disease

2019· article· en· W2963618904 on OpenAlexfundno aff
Damiano Archetti, Silvia Ingala, Vikram Venkatraghavan, Viktor Wottschel, Alexandra L. Young, Maura Bellio, Esther E. Bron, Stefan Klein, Frederik Barkhof, Daniel C. Alexander, Neil P. Oxtoby, Giovanni B. Frisoni, Alberto Redolfi

Bibliographic record

VenueNeuroImage Clinical · 2019
Typearticle
Languageen
FieldMedicine
TopicDementia and Cognitive Impairment Research
Canadian institutionsnot available
FundersUCLH Biomedical Research CentreNational Institute of Biomedical Imaging and BioengineeringCanadian Institutes of Health ResearchNational Institute of Mental HealthHorizon 2020 Framework ProgrammeGenentechIXICOH. Lundbeck A/SServierInnovative Medicines InitiativeEisaiNational Institute on AgingNational Institute for Health and Care ResearchNorthern California Institute for Research and EducationPfizerBiogenBioClinicaNational Center for Research ResourcesF. Hoffmann-La RocheNational Institutes of HealthVirginia Information Technologies AgencyUniversity of Southern CaliforniaNovartis Pharmaceuticals CorporationU.S. Department of DefenseEli Lilly and CompanyBristol-Myers SquibbAmsterdam NeuroscienceAlzheimer's Drug Discovery FoundationHorizon 2020Fujirebio EuropeEuropean Federation of Pharmaceutical Industries and AssociationsJanssen Alzheimer Immunotherapy Research And DevelopmentEuropean CommissionAbbVieAlzheimer's AssociationFoundation for the National Institutes of HealthUniversity College London Hospitals NHS Foundation TrustGE HealthcareAlzheimer's Disease Neuroimaging InitiativeMedical Research CouncilMeso Scale Diagnostics
KeywordsNeuroimagingDiseaseAlzheimer's Disease Neuroimaging InitiativeDementiaCognitionMedicineClinical trialAlzheimer's diseasePsychologyInternal medicineNeuroscience

Abstract

fetched live from OpenAlex

= 0.906). In discriminant analyses, significant differences (p-value ≤ 0.05) between the staging of subjects from training and test sets were observed in both models. No significant difference between the staging of subjects from the training and test was observed (p-value > 0.05) when considering a subset composed by 562 subjects for which all biomarker families (cognitive, imaging and CSF) are available. Event sequence obtained with DEBM recapitulates the heuristic models in a data-driven fashion and is clinically plausible. We demonstrated inter-cohort transferability of two disease progression models and their robustness in detecting AD phases. This is an important step towards the adoption of data-driven statistical models into clinical domain.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.045
metaresearch head score (Gemma)0.043
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.045
Threshold uncertainty score0.238

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0450.043
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.202
GPT teacher head0.458
Teacher spread0.256 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations49
Published2019
Admission routes1
Has abstractyes

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