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Record W2966556167 · doi:10.1002/ajmg.a.61306

Phenotype delineation of <i>ZNF462</i> related syndrome

2019· article· en· W2966556167 on OpenAlexafffund
Paul Kruszka, Tommy Hu, Sung‐Kook Hong, Rebecca Signer, Benjamin Cogné, Betrand Isidor, Sarah Mazzola, Jacques C. Giltay, Koen L.I. van Gassen, Eleina England, Lynn Pais, Charlotte W. Ockeloen, Pedro A. Sanchez‐Lara, Esther Kinning, Darius J. Adams, Kayla Treat, Wilfredo Torres‐Martinez, Maria Francesca Bedeschi, Maria Iascone, Stephanie Blaney, Oliver Bell, Tiong Yang Tan, Marie‐Ange Delrue, Julie A. Jurgens, Brenda J. Barry, Elizabeth C. Engle, Sarah Savage, Nicole Fleischer, Julián A. Martínez-Agosto, Kym M. Boycott, Elaine H. Zackai, Maximilian Muenke

Bibliographic record

VenueAmerican Journal of Medical Genetics Part A · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicRNA modifications and cancer
Canadian institutionsChildren's Hospital of Eastern OntarioUniversity of OttawaUniversité de MontréalCentre Hospitalier Universitaire Sainte-JustineEssar Steel Algoma (Canada)
FundersEunice Kennedy Shriver National Institute of Child Health and Human DevelopmentNational Eye InstituteNational Human Genome Research InstituteNational Heart, Lung, and Blood InstituteCanadian Institutes of Health ResearchNational Institutes of Health
KeywordsHaploinsufficiencyPhenotypePalpebral fissurePtosisHypotoniaNoonan syndromeLoss functionDysgenesisCraniosynostosisBiologyMedicineGeneticsAnatomySurgery

Abstract

fetched live from OpenAlex

Zinc finger protein 462 (ZNF462) is a relatively newly discovered vertebrate specific protein with known critical roles in embryonic development in animal models. Two case reports and a case series study have described the phenotype of 10 individuals with ZNF462 loss of function variants. Herein, we present 14 new individuals with loss of function variants to the previous studies to delineate the syndrome of loss of function in ZNF462. Collectively, these 24 individuals present with recurring phenotypes that define a multiple congenital anomaly syndrome. Most have some form of developmental delay (79%) and a minority has autism spectrum disorder (33%). Characteristic facial features include ptosis (83%), down slanting palpebral fissures (58%), exaggerated Cupid's bow/wide philtrum (54%), and arched eyebrows (50%). Metopic ridging or craniosynostosis was found in a third of study participants and feeding problems in half. Other phenotype characteristics include dysgenesis of the corpus callosum in 25% of individuals, hypotonia in half, and structural heart defects in 21%. Using facial analysis technology, a computer algorithm applying deep learning was able to accurately differentiate individuals with ZNF462 loss of function variants from individuals with Noonan syndrome and healthy controls. In summary, we describe a multiple congenital anomaly syndrome associated with haploinsufficiency of ZNF462 that has distinct clinical characteristics and facial features.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.790
Threshold uncertainty score0.287

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.261
Teacher spread0.255 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations39
Published2019
Admission routes2
Has abstractyes

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