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The Thymidine Dideoxynucleoside Analogue, Alovudine, Inhibits the Mitochondrial DNA Polyermase, POLG, Impairs Oxidative Phosphorylation and Promotes Monocytic Differentiation in AML

2017· article· en· W2966760111 on OpenAlexaff
Dana Yehudai‐Ofir, Sanduni U. Liyanage, Rose Hurren, Marcela Gronda, Danny V. Jeyaraju, Xiaoming Wang, Thirushi Siriwardena, Yulia Jitkova, Aaron D. Schimmer, Biljana Rizoska, Paul Targett‐Adams, Mark R. Albertella

Bibliographic record

VenueBlood · 2017
Typearticle
Languageen
FieldMedicine
TopicAcute Myeloid Leukemia Research
Canadian institutionsUniversity of TorontoPrincess Margaret Cancer CentreUniversity Health Network
Fundersnot available
KeywordsBiologyMitochondrial DNAMolecular biologyMitochondrionRespiratory chainOxidative phosphorylationPhosphorylationNuclear DNADNA polymeraseDNA replicationDNACell biologyBiochemistryGene

Abstract

fetched live from OpenAlex

Mitochondria contain circular DNA that encodes for 13 proteins that comprise subunits of the respiratory chain and are necessary for oxidative phosphorylation. The replication of mitochondrial DNA (mt DNA) requires nucleotides from both the mitochondria and cytoplasm and is regulated by POLG (Polymerase γ), the sole mtDNA polymerase. Acute Myeloid Leukemia (AML) cells and stem cells have increased mitochondrial biogenesis and increased reliance on oxidative phosphorylation. Moreover, AML cells over-express cytoplasmic nucleoside kinases that phosphorylate nucleosides to their active forms. Alovudine (39-deoxy-39-fluorothymidine) is a dideoxynucleoside analogue of thymidine that is phosphorylated by nucleoside kinases into its active form where it selectively and potently inhibits POLG over nuclear polymerase. Therefore, we evaluated the effects of alovudine on AML cells in vitro and in vivo. OCI-AML2 and MV4-11 leukemia cells were treated with increasing concentrations of alovudine. After 6 days of treatment, alovudine decreased mtDNA by over 95% in OCI-AML2 and MV4-11 cells at 1000nM and 50nM, respectively. In contrast, cytarabine which inhibits nuclear DNA replication, did not alter levels of mtDNA. We measured levels of mt-encoded COXI and COXII proteins, subunits of respiratory chain subunit IV. Concentrations of alovudine that reduced mtDNA also reduced levels of COXI and COXII proteins in OCI-AML2 and MV4-11 cells. In contrast, alovudine did not change levels of COXIV, a subunit of respiratory chain complex IV, which is encoded by nuclear DNA, translated in the cytoplasm, and imported into the mitochondria. Consistent with reductions in respiratory chain IV subunits, alovudine decreased basal oxygen consumption in OCI-AML2 and MV4-11 cells. Finally, concentrations of alovudine that reduced mtDNA and impaired oxidative phosphorylation reduced the growth and viability of AML cell lines. We also tested the effects of alovudine on primary AML cell; In primary AML cells alovudine reduced mtDNA and decreased cell viability. Next, we examined the effects of alovudine on the growth of AML cells in vivo . SCID mice xenografted with OCI-AML2 cells were treated with alovudine (50mg/kg p.o bid 5/7 days). Alovudine decreased the growth of AML cells in vivo by 70%. At doses that decreased AML growth, no change in mouse body weight, serum chemistries, or organ histology was observed. Recent studies demonstrate that mitochondrial pathways and metabolism can regulate cell fate and differentiation. Therefore, we explored the effects of alovudine on the differentiation of OCI-AML2, MV4-11and TEX cell-lines, and the 8277 primary AML culture system. Alovudine upregulated expression of CD11b, CD14 and CD15 surface markers associated with cell differentiation. In addition, alovudine increased non-specific esterase staining and induced monocytic morphology. In summary, aluvodine is a potent inhibitor of POLG that impairs oxidative phosphorylation in AML and decreases the growth of AML cells in vitro and in vivo . We discovered that inhibition of POLG induces the monocytic differentiation of AML cells. Thus, we identified new mechanisms by which mitochondrial pathways control differentiation in AML and highlight the POLG inhibitor, aluvodine, as a novel potential therapeutic agent for this disease Disclosures Schimmer: Takeda Pharmaceuticals: Research Funding; Medivir: Research Funding; Novartis Pharmaceuticals: Honoraria. Rizoska: Medivir: Employment. Targett-Adams: Medivir: Employment. Albertella: Medivir: Employment.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.278
Teacher spread0.261 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2017
Admission routes1
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