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Record W2968995118

Abstract #4925: Unique role for the Rb LxCxE binding domain in lung development

2009· article· en· W2968995118 on OpenAlexaboutno aff
Mohammad Ahmad, Zhen Huang, Frederick A. Dick, Martin Post, Colin McKerlie, Rod Bremner

Bibliographic record

VenueCancer Research · 2009
Typearticle
Languageen
FieldImmunology and Microbiology
Topicinterferon and immune responses
Canadian institutionsnot available
Fundersnot available
KeywordsRetinoblastoma proteinEctopic expressionRetinoblastomaBiologyNull alleleCarcinogenesisMolecular biologyGeneticsCell biologyApoptosisAlleleCell cycleGene
DOInot available

Abstract

fetched live from OpenAlex

The retinoblastoma tumor suppressor protein (Rb) regulates cell division, death and differentiation. Loss of Rb causes retinoblastoma in humans. Previously we developed a mouse model of retinoblastoma using conditional knockout of Rb because germline Rb deletion is lethal. Rb exon 19 is floxed and retinal-specific deletion is driven by \#945;-Cre (\#945;-CreRbf/f). The developing Rb null retina (\#945;-CreRbf/f) shows ectopic cell division and death of certain neurons in the developing retina. Loss of both Rb and its relative p107 (\#945;-CreRbf/f;p107-/-) lead to more extensive ectopic division and additional phenotypes of cone death and tumorigenesis. Rb binds E2f transcription factors and regulates their activity. While bound to E2fs, Rb can also recruit corepressors, many of which have a unique LxCxE motif (L-Leucine, C-Cysteine, E-Glutamate, and X-any amino acid) which binds the LxCxE-binding domain (LBD) of Rb. The role of LxCxE-motif proteins (LMPs) corepressors in mediating Rb function in vivo is unknown. We hypothesized that they may be critical for only a subset of Rb activities. Thus, we used mice with a defective LBD (Rb\#916;), which cannot bind most LMPs, to define LxCxE-corepressor-dependent Rb activities in the retina. One (\#945;-CreRbf/\#916; ) or two (Rb\#916;/\#916;) Rb\#916; alleles suppressed the ectopic division and neuronal apoptosis seen in the Rb null (\#945;-CreRbf/f) retina, although low levels of apoptosis were detected at post natal day 18 (P18). In the absence of p107 and one Rb\#916; alleles (\#945;-CreRbf/\#916;;p107-/-), abnormal cell division and death were partially and tumorigenesis was completely suppressed. Importantly, Rb\#916;/\#916;;p107-/- mice did not survive beyond P0-P1 because of extensive lung hyperplasia, but did not show ectopic division or death in the retina. Collectively, these data suggest that recruitment of LMP corepressors by Rb is dispensable for promoting cell cycle exit and survival in the retina, but regulates lung development. Acknowledgement: This study was supported by grants from CIHR and Foundation Fighting Blindness Canada. Citation Information: In: Proc Am Assoc Cancer Res; 2009 Apr 18-22; Denver, CO. Philadelphia (PA): AACR; 2009. Abstract nr 4925.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.010
Threshold uncertainty score0.035

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0100.004

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.054
GPT teacher head0.394
Teacher spread0.340 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2009
Admission routes1
Has abstractyes

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