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Record W2969786980 · doi:10.1093/infdis/jiz423

Plasma Levels of C-Type Lectin REG3α and Gut Damage in People With Human Immunodeficiency Virus

2019· article· en· W2969786980 on OpenAlexafffund
Stéphane Isnard, Rayoun Ramendra, Franck P. Dupuy, John Lin, Brandon Fombuena, Nikola Kokinov, Ido P. Kema, Mohammad‐Ali Jenabian, Bertrand Lebouché, Cecilia T. Costiniuk, Petronela Ancuța, Nicole F. Bernard, Michael Silverman, Péter L. Lakatos, Madéleine Durand, Cécile Tremblay, Jean‐Pierre Routy, C Milne, Stephanie Lavoie, J Friedman, M Duchastel, F Villielm, F Asselin, Michel Boissonnault, Pierre-Jean Maziade, M Milne, N Z Miaki, Mathieu Thériault, Bernard Lessard, M. A. Charron, S Dufresne, Maxime Turgeon, Sylvie Vézina, Emmanuelle Huchet, J P Kerba, Marc Poliquin, Sebastien Poulin, Pierre-Alexandre Rochette, Patrice Junod, Danièle Longpré, Robert Pilarski, E Sasseville, Louise Charest, A Hamel, A Cloutier-Blais, Samuel Massoud, F Chano, Benoît Trottier, Louise G. Labrecque, Claude Fortin, V Hal-Gagne, M.J. Romero Muñoz, Benoit Deligne, Valérie Martel‐Laferrière, Marianne Goyer, Marty Teltscher, Alexandra de Pokomandy, Joseph Cox, E Beauchamp, Marina B. Klein, Louis‐Patrick Haraoui

Bibliographic record

VenueThe Journal of Infectious Diseases · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGut microbiota and health
Canadian institutionsWestern UniversityUniversité du Québec à MontréalCentre Hospitalier de l’Université de MontréalMcGill UniversityUniversité de MontréalMcGill University Health Centre
FundersCanadian Institutes of Health Research
KeywordsImmunologyCD8InflammationViral loadBiologyChromosomal translocationHuman immunodeficiency virus (HIV)Immune systemMedicineGene

Abstract

fetched live from OpenAlex

BACKGROUND: Regenerating islet-derived protein 3α (REG3α) is an antimicrobial peptide secreted by intestinal Paneth cells. Circulating REG3α has been identified as a gut damage marker in inflammatory bowel diseases. People living with human immunodeficiency virus (PWH) on antiretroviral therapy (ART) present with an abnormal intestinal landscape leading to microbial translocation, persistent inflammation, and development of non-AIDS comorbidities. Herein, we assessed REG3α as a marker of gut damage in PWH. METHODS: Plasma from 169 adult PWH, including 30 elite controllers (ECs), and 30 human immunodeficiency virus (HIV)-uninfected controls were assessed. REG3α plasma levels were compared with HIV disease progression, epithelial gut damage, microbial translocation, and immune activation markers. RESULTS: Cross-sectionally, REG3α levels were elevated in untreated and ART-treated PWH compared with controls. ECs also had elevated REG3α levels compared to controls. Longitudinally, REG3α levels increased in PWH without ART and decreased in those who initiated ART. REG3α levels were inversely associated with CD4 T-cell count and CD4:CD8 ratio, while positively correlated with HIV viral load in untreated participants, and with fungal product translocation and inflammatory markers in all PWH. CONCLUSIONS: Plasma REG3α levels were elevated in PWH, including ECs. The gut inflammatory marker REG3α may be used to evaluate therapeutic interventions and predict non-AIDS comorbidity risks in PWH.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.250
Teacher spread0.243 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations82
Published2019
Admission routes2
Has abstractyes

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