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Record W2970490479 · doi:10.1111/epi.16316

Both gain‐of‐function and loss‐of‐function <i> de novo <scp>CACNA</scp> 1A </i> mutations cause severe developmental epileptic encephalopathies in the spectrum of Lennox‐Gastaut syndrome

2019· article· en· W2970490479 on OpenAlexafffund
Xiao Jiang, Praveen K. Raju, Nazzareno D’Avanzo, Mathieu Lachance, Julie Pepin, François Dubeau, Wendy G. Mitchell, Luis Bello‐Espinosa, Tyler Mark Pierson, Berge A. Minassian, Jean‐Claude Lacaille, Elsa Rossignol

Bibliographic record

VenueEpilepsia · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicIon channel regulation and function
Canadian institutionsMcGill UniversityHospital for Sick ChildrenMontreal Neurological Institute and HospitalUniversity of CalgaryUniversité de Montréal
FundersFonds de Recherche du Québec - SantéCanadian Institutes of Health ResearchSavoy Foundation
KeywordsLoss functionMutationEpilepsyHEK 293 cellsMutantBiologyGeneGeneticsNeurosciencePhenotype

Abstract

fetched live from OpenAlex

Abstract Objective Developmental epileptic encephalopathies ( DEE s) are genetically heterogeneous severe childhood‐onset epilepsies with developmental delay or cognitive deficits. In this study, we explored the pathogenic mechanisms of DEE ‐associated de novo mutations in the CACNA 1A gene. Methods We studied the functional impact of four de novo DEE ‐associated CACNA 1A mutations, including the previously described p.A713T variant and three novel variants (p.V1396M, p.G230V, and p.I1357S). Mutant cDNA s were expressed in HEK 293 cells, and whole‐cell voltage‐clamp recordings were conducted to test the impacts on Ca V 2.1 channel function. Channel localization and structure were assessed with immunofluorescence microscopy and three‐dimensional (3D) modeling. Results We find that the G230V and I1357S mutations result in loss‐of‐function effects with reduced whole‐cell current densities and decreased channel expression at the cell membrane. By contrast, the A713T and V1396M variants resulted in gain‐of‐function effects with increased whole‐cell currents and facilitated current activation (hyperpolarized shift). The A713T variant also resulted in slower current decay. 3D modeling predicts conformational changes favoring channel opening for A713T and V1396M. Significance Our findings suggest that both gain‐of‐function and loss‐of‐function CACNA 1A mutations are associated with similarly severe DEE s and that functional validation is required to clarify the underlying molecular mechanisms and to guide therapies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.408
Threshold uncertainty score0.542

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.212
Teacher spread0.204 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations95
Published2019
Admission routes2
Has abstractyes

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