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Record W2972692528 · doi:10.1101/765263

Spatial distribution of lamin A determines nuclear stiffness and stress-mediated deformation

2019· preprint· en· W2972692528 on OpenAlexafffund
Luv Kishore Srivastava, Zhaoping Ju, Ajinkya Ghagre, Allen J. Ehrlicher

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2019
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicNuclear Structure and Function
Canadian institutionsMcGill University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsLaminMechanotransductionNucleusDeformation (meteorology)Nuclear laminaStiffnessCell biologyBiophysicsPhysicsBiologyNuclear proteinGenetics

Abstract

fetched live from OpenAlex

Abstract The nucleus is the largest organelle and information center of the cell; while diverse cellular components have been identified as mechanotransduction elements, the deformation of the nucleus itself is emerging as a critical mechanosensory mechanism, suggesting that the nuclear stiffness is essential in determining responses to intracellular and extracellular stresses. The nuclear membrane protein, lamin A, is known to be a dominant component in nuclear stiffening; however, the quantitative relationship between lamin A expression and nuclear deformation is still unclear. Here we measure the nuclear moduli as a function of lamin A expression and applied stress, revealing a linear dependence of bulk modulus on lamin A expression. We also find that the bulk modulus is anisotropic, with the vertical axis of the nucleus being more compliant than the minor and major axis. To examine how lamin A influences nuclear mechanics at the sub-micron scale we correlated the spatial distribution of lamin A with 3D nuclear envelope deformation, revealing that local areas of the nuclear envelope with higher expression levels of lamin A have correspondingly lower local deformations, and that increased lamin A expression levels result in a narrower distribution of smaller deformations. These findings describe the complex dispersion of nuclear deformations as a function of lamin A expression and distribution and implicate a role in mechanotransduction.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.703
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.188
Teacher spread0.183 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2019
Admission routes2
Has abstractyes

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