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Record W2978232132

Cloing and analyzing of cDNA for ethylene receptor, lcersi, of lychee (Litchi chinensis)

2003· article· en· W2978232132 on OpenAlex
Han Jicheng, Xuanjun Fang

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

Venue分子植物育种 · 2003
Typearticle
Languageen
FieldChemistry
TopicPlant-Derived Bioactive Compounds
Canadian institutionsnot available
Fundersnot available
KeywordsComplementary DNABiologyGeneHistidine kinaseGenBankTransmembrane domainTransmembrane proteinPeptide sequenceOpen reading frameMolecular biologyHistidineGeneticsBiochemistryAmino acidReceptor
DOInot available

Abstract

fetched live from OpenAlex

The cDNA for an ethylene receptor, LcERS1, of Lychee (Litchi chinensis Sonn.) was obtained by a combination of RT-PCR and RACE technique. The length of cloned cDNA was 2, 193 bp, which include an Open Reading Frame of 1, 848 bp,from No.87 to No. 1934, encoding 615 amino acids, and about 68kD molecular weights. Genbank accession number for LcERS1 is AY311484. The putative protein has three conserved regions, one of them has the homologue with the histidine kinase A (phosphoreceptor) region, dimerisation and phsphoacceptor domain of histidine kinases. These regions are typical phosphotransfer site in the signal transduction system. The other region is GAF domain, which has more positives with the ethylene receptor gene (ers). The analysis of the protein structure and function suggested this putative protein be similar to the ethylene receptor gene, histidine protein kinase and the kinase region of the bacterium two-component signaling. The H and F motifs of the ethylene receptor genes were observed in the kinase region of the putative protein of lychee, they lies in 423-432 amino acid residues and 532-543 the amtno acid residues respectively. The conserved, sequence of His MNHE.MRTPM. and F is LMQTILNTMGA.. The putatve protein we obtained from lychee has the typical characters of ethylene receptor gene, which including three transmembrane regions in the N-terminal, one conserved histidine kinase domain and one GAF domain in the C-terminal. We strongly suggested that the cDNA sequence from lychee be the full length cDNA gene of the ethylene receptor gene (ers).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.023
Threshold uncertainty score0.601

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.242
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it