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Emerging Presence of Zoonotic Gastrointestinal Pathogen: Identification of Neorickettsia Spp. in Fish Species in Grenada, West Indies

2016· article· en· W2978643256 on OpenAlexaff
LeighMae Provencher, Kathryn Gibson

Bibliographic record

VenueThe American Journal of Gastroenterology · 2016
Typearticle
Languageen
FieldEnvironmental Science
TopicParasite Biology and Host Interactions
Canadian institutionsUniversity of Victoria
Fundersnot available
KeywordsBiologyZoologyDigeneaEcologyHelminthsTrematoda

Abstract

fetched live from OpenAlex

Introduction: The presence of Neorickettsia, a genus of obligate intracellular bacteria is possible in Grenada, West Indies, suggested through its prevalence in its neighboring continents of USA and South America and their shared waterways. The geographical presence of different Neorickettsia species has both medical and veterinary implications, causing Sennetsu Fever in humans (N. sennetsu), salmon poisoning disease in dogs (N. helminthoeca), and Potomac horse fever in equids (N. risticii). There is also concern regarding the not yet elucidated human pathogenicity of Neorickettsia spp.in relation to known trematode-associated gastrointestinal illnesses in humans. Our study serves to begin the process of defining the presence or suggesting the absence of Neorickettsia in fish from Grenada, West Indies. Methods: Forty-two specimens consisting of four different locally consumed freshwater fish species (Hypostomus Plecostomus - Common Pleco,Oreochromis mossambicus -Round Scad/Robin, Decapterus punctatus-Mozambique Tilapia, and Selar crumenopthalmus- Bigeye Scad/Jack) were acquired deceased, and refrigerated minimally awaiting dissection. Tissue samples (1cm depth, 4x4cm area) were taken from the left lateral musculature of each fishand examined microscopically for encysted trematodes. Potential cysts were subjected to RFLP analysis to identify potential Neorickettsia spp host trematode spp.Table 1: Summary of Freshwater Fish DissectionsResults: One Selar crumenopthalmus specimen yielded a Neorickettsia-incompatible nematode species Anasakis typica, identified through RFLP analysis. The remaining 41 samples also failed to yield positive identification of trematode species with Neorickettsia-hosting capabilities. Conclusion: Our study addressed the geographic distribution of Neorickettsia spp. in the country of Grenada, specifically its freshwater rivers. Through dissection of freshwater fish followed by DNA analysis of any potential trematodes, we documented negative results in an initial survey for trematodes which could potentially serve as hosts for Neorickettsia spp. in an assortment of species of locally consumed freshwater fish. Further studies expanding the survey to a greater variety and number of fish spp. as well as other implicated species such as freshwater snails, piscivorous and insectivorous bats, and mongooses will provide further insight regarding the geographic distribution of Neorickettsia in Grenada, WI, and will assist to inform associated risks posed to the regional population's gastrointestinal health.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.034
Threshold uncertainty score0.068

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.269
Teacher spread0.259 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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