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Record W2980692934 · doi:10.1016/j.jalz.2019.06.4463

O2‐03‐01: AMYLOIDOSIS INDUCES EARLY METABOLIC REORGANIZATION

2019· article· en· W2980692934 on OpenAlexaff
Wagner S. Brum, Andrei Bieger, Guilherme G. Schu Peixoto, Tharick A. Pascoal, Andréa Lessa Benedet, Pedro Rosa‐Neto, Eduardo R. Zimmer

Bibliographic record

VenueAlzheimer s & Dementia · 2019
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBioinformatics and Genomic Networks
Canadian institutionsMcGill University
Fundersnot available
KeywordsStandardized uptake valuePositron emission tomographyFluorodeoxyglucoseNeuroimagingAlzheimer's diseaseNuclear medicineInternal medicineMedicineDiseasePathologyBiologyNeuroscience

Abstract

fetched live from OpenAlex

Cerebral glucose hypometabolism – indexed by 18-fluorodeoxyglucose ([F]FDG) positron emission tomography (PET) imaging – is a metabolic signature of Alzheimer's disease (AD) patients. More than providing regional estimations of glucose metabolism, [F]FDG network analyses constitute a sophisticated approach for analyzing [F]FDG data at the group level. [F]FDG networks have the potential for unraveling disease-related cerebral metabolic architecture abnormalities. Here, we developed a novel and refined metabolic brain network method that has the potential to significantly detect subtle alterations in glucose metabolism and applied this method to cognitively unimpaired (CU) amyloid positive (Aβ+) and amyloid negative (Aβ-) individuals. We hypothesized similar glucose metabolism between groups but a more disorganized metabolic brain network in the Aβ+ group. We selected the 186 CU individuals from the ADNI1 and ADNI2 studies who had available data for [F]FDG-PET and CSF Aβ1-42 (Elecsys® immunoassay). Aβ positivity cutoff was defined as <1098 pg/mL. CU individuals were divided in Aβ- (n=108) and Aβ+ (n=78). Standardized uptake value ratio (SUVr) were calculated using the pons as reference region. Kruskal-Wallis between-groups corrected by false discovery rate (FDR) were used to compare regions classically hypometabolic in AD. Group-based metabolic brain networks were constructed using 96 volumes of interest (VOIs). We defined representative networks by computing the group-wise mean correlation matrix based on 10000 random sub-sampling. Networks were corrected for multiple comparisons using FDR. Graph theoretical measures such as density and global efficiency were calculated for each of the subsamples. Statistical significance was set as p<0.05. Aβ+ and Aβ- individuals presented similar median SUVR values in regions classically associated with AD (parieto-temporal areas, precuneus, cingulate region, hippocampal formation and frontal cortex, figure 1). By contrast, a widespread hyposynchronyc pattern was identified in the Aβ+ group (Figure 2A-B). Graph measures demonstrates a lower global efficiency (Figure 2C) and decreased density (Figure 2D).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.023

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0070.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.219
Teacher spread0.209 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

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