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Record W2980960612 · doi:10.5376/ijmeb.2019.09.0002

Genetic Diversity of African Mistletoe (<i>Loranthus micranthus</i> Linn.) Accessions from Selected Plant Hosts Using Internal Transcribed Spacer (<i>ITS</i>) Gene

2019· article· en· W2980960612 on OpenAlexvenueno aff
A. N. Osuagwu, V. C. Oparaugo, E.E. Ekerette

Bibliographic record

VenueInternational Journal of Molecular Evolution and Biodiversity · 2019
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Parasitism and Resistance
Canadian institutionsnot available
Fundersnot available
KeywordsGenetic diversityBiologyHost (biology)BotanyGenetic distanceNucleotide diversityHorticultureGenetic variationHaplotypeGeneGenotypeGeneticsPopulationMedicine

Abstract

fetched live from OpenAlex

African mistletoe ( Loranthus micranthus  Linn.) is a parasitic plant which has shown to contain biologically active agents that have disease curing effects on humans. The present study aimed at evaluating the genetic diversity of  L. micranthus  accessions established on selected plant host based on  ITS  gene. 9 samples were selected for PCR amplification and sequencing of the  its 1 and  its 4 regions. The results revealed 104 and 89 polymorphic sites for  its1  and  its4  respectively. Haplotype diversity of 0.971+0.064 and nucleotide diversity 0.174+0.071 were recorded in  its1  while haplotype diversity of 0.917+0.092 and nucleotide diversity of 0.231+0.027 were recorded in  its4 . Phylogenetic analysis grouped the samples into 2 clusters based on the  its  regions. A high genetic distance (0.597) for  its1  was obtained between samples from Pepper fruit and samples obtained from other host trees (African apple, Avocado and Monkey kola) while a low genetic distance (0.000) was obtained between  C. apiculatum  (LMV9) and African apple host (LMV4). The highest genetic distance (0.827) for  its4  was obtained between  C. apiculatum  (LMV9) and African apple host (LMV4) while the lowest genetic distance (0.000) was obtained between Rubber hosts (LMV1, LMV2) and Pepper fruit host (LMV8). The results revealed some genetic diversity amongst the mistletoe grown on different hosts suggesting that host trees and geographical location might contribute to genetic diversity. It also showed that  its1  and  4  regions differ in their variation discernment pattern in mistletoe and similar studies can be conducted in larger populations to accurately link genetic similarity/variation to host specificity and geographical origins.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.918
Threshold uncertainty score0.707

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.207
Teacher spread0.194 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

Explore more

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