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To impute or exclude, what’s the impact?

2019· article· en· W2981584562 on OpenAlexaffabout
Anders C. Erickson, Michael Bräuer, Tanya Christidis, Amanda J. Pappin, Dan L. Crouse, Scott Weichenthal, Lauren Pinault, M.K.G. Tjepkema, Rick Burnett

Bibliographic record

VenueEnvironmental Epidemiology · 2019
Typearticle
Languageen
FieldEnvironmental Science
TopicHealth, Environment, Cognitive Aging
Canadian institutionsHealth CanadaUniversity of New BrunswickStatistics CanadaMcGill UniversityUniversity of British Columbia
Fundersnot available
KeywordsMissing dataImputation (statistics)CovariateCensoring (clinical trials)StatisticsProportional hazards modelDemographyCensusEconometricsActuarial scienceMedicineGeographyMathematicsEconomicsPopulationSociology

Abstract

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TPS 691: Methods of measurement, design and data analysis, Exhibition Hall, Ground floor, August 28, 2019, 3:00 PM - 4:30 PM Background: Missing data is persistently a thorn in the side of data science researchers. While there are various ways to deal with missing data, from basic to sophisticated, it is critical to understand the pattern and characteristics of your missing data (i.e. is it missing (completely) at random?). Most importantly, how does the missing impact the dependent variable? Aim: The purpose of this work is to assess the pattern of missing person-year data, particularly for the years leading up to the censoring event (e.g. death), and to examine the impact of excluding or imputing on survival model risk estimates. Methods: We use the 2001 Canadian Census Health and Environment Cohort (CanCHEC, N=3.1 million, 16-years follow-up). Residential postal codes reported on annual income tax filings were used to account for residential mobility among respondents and for exposure and area-based covariate assignment. Missing postal codes were assessed by proximity in years to censoring event (non-accidental mortality) and relationship to other covariates (education, income, etc.). Imputation took three forms, national annual mean, person-year mean, truncated postal code mean. We use Cox survival models to estimate hazard ratios of fine particulate matter (PM2.5) to assess the impact of exclusion versus imputation. Results: Four percent of person-years were missing postal codes, with slightly higher proportions in the years leading up to a mortality event. Imputation method had little impact on the overall PM2.5 mean (7.03 vs. 7.04 μg/m3); however, levels of PM2.5 were notably larger among subjects who died and were missing data compared to survivors (7.57 vs. 7.04 μg/m3) and tended to have lower socioeconomic characteristics. Preliminary results suggest that excluding person-years with the demonstrated pattern of missing can have large nullifying impact on the PM2.5 hazard ratio. Conclusion: Missing data can impact results. Discussion will focus on sensitivity tests to examine missing data.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.118
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0030.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.001
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0410.049

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.038
GPT teacher head0.336
Teacher spread0.298 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes2
Has abstractyes

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