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Record W2984866711 · doi:10.1016/j.cpc.2019.107042

The Abinitproject: Impact, environment and recent developments

2019· article· en· W2984866711 on OpenAlexafffund
Xavier Gonze, Bernard Amadon, Gabriel Antonius, Frédéric Arnardi, Lucas Baguet, Jean-Michel Beuken, Jordan Bieder, François Bottin, J. Bouchet, Éric Bousquet, Nils Brouwer, Fabien Bruneval, Guillaume Brunin, Théo Cavignac, Jean-Baptiste Charraud, Wei Chen, Michel Côté, Stefaan Cottenier, Jules Denier, Grégory Geneste, Philippe Ghosez, Matteo Giantomassi, Yannick Gillet, Olivier Gingras, D. R. Hamann, Geoffroy Hautier, Xu He, N. Helbig, N. A. W. Holzwarth, Yongchao Jia, F. Jollet, William Lafargue‐Dit‐Hauret, Kurt Lejaeghere, Miguel A. L. Marques, Alexandre Martin, Cyril Martins, Henrique Miranda, Francesco Naccarato, Kristin A. Persson, Guido Petretto, Valentin Planes, Yann Pouillon, Sergei Prokhorenko, Fabio Ricci, Gian‐Marco Rignanese, A. Romero, Michaël Schmitt, Marc Torrent, Michiel J. van Setten, Benoît Van Troeye, Matthieu J. Verstraete, G. Zérah, Josef W. Zwanziger

Bibliographic record

VenueComputer Physics Communications · 2019
Typearticle
Languageen
FieldMaterials Science
TopicElectronic and Structural Properties of Oxides
Canadian institutionsDalhousie UniversityUniversité de MontréalUniversité du Québec à Trois-Rivières
FundersNatural Sciences and Engineering Research Council of CanadaVlaamse regeringBasic Energy SciencesFonds Wetenschappelijk OnderzoekOffice of ScienceFédération Wallonie-BruxellesCompute CanadaU.S. Department of EnergyFonds De La Recherche Scientifique - FNRSDeutsche ForschungsgemeinschaftNational Science Foundation
KeywordsPython (programming language)Computer scienceProgramming language

Abstract

fetched live from OpenAlex

Abinit is a material- and nanostructure-oriented package that implements density-functional theory (DFT) and many-body perturbation theory (MBPT) to find, from first principles , numerous properties including total energy, electronic structure, vibrational and thermodynamic properties, different dielectric and non-linear optical properties , and related spectra. In the special issue to celebrate the 40th anniversary of CPC, published in 2009, a detailed account of Abinit was included [Gonze et al. (2009)], and has been amply cited. The present article comes as a follow-up to this 2009 publication. It includes an analysis of the impact that Abinit has had, through for example the bibliometric indicators of the 2009 publication. Links with several other computational materials science projects are described. This article also covers the new capabilities of Abinit that have been implemented during the last three years, complementing a recent update of the 2009 article published in 2016. Physical and technical developments inside the abinit application are covered, as well as developments provided with the Abinit package, such as the multibinit and a-tdep projects, and related Abinit organization developments such as AbiPy . The new developments are described with relevant references, input variables, tests, and tutorials. Program summary Program Title: Abinit Program Files doi: http://dx.doi.org/10.17632/csvdrr4d68.1 Licensing provisions: GPLv3 Programming language: Fortran2003, Python Journal reference of previous version: X .Gonze et al, Comput. Phys. Commun. 205 (2016) 106–131 Does the new version supersede the previous version?: Yes. The present 8.10.3 version is now the up-to-date stable version of abinit , and supercedes the 7.10.5 version. Reasons for the new version: New developments Summary of revisions: • Many new capabilities of the main abinit application, related to density-functional theory, density-functional perturbation theory , GW, the Bethe-Salpeter equation, dynamical mean-field theory, etc. • New applications in the package: multibinit (second-principles calculations)and tdep (temperature-dependent properties) Nature of problem: Computing accurately material and nanostructure properties: electronic structure, bond lengths, bond angles, primitive cell , cohesive energy , dielectric properties , vibrational properties, elastic properties , optical properties , magnetic properties , non-linear couplings, electronic and vibrational lifetimes, etc. For large-scale systems, second-principles calculations, building upon the first-principles results, are also possible. Solution method: Software application based on density-functional theory and many-body perturbation theory , pseudopotentials , with plane waves or wavelets as basis functions. Different real-time algorithms are implemented for second-principles calculations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.009
metaresearch head score (Gemma)0.008
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.058
Threshold uncertainty score0.192

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0090.008
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.005
Science and technology studies0.0010.001
Scholarly communication0.0050.005
Open science0.0030.007
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0580.018

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.253
Teacher spread0.229 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations729
Published2019
Admission routes2
Has abstractyes

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Same venueComputer Physics CommunicationsSame topicElectronic and Structural Properties of OxidesFrench-language works237,207