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Record W2985489262

ABERRANT METABOLIC AND SIGNALING PATHWAYS UNDERLIE IMPAIRED STEM CELL FUNCTION IN HUMAN OBESITY

2019· dissertation· en· W2985489262 on OpenAlexfundno aff
Kanwaldeep Singh

Bibliographic record

VenueMacSphere (McMaster University) · 2019
Typedissertation
Languageen
FieldMedicine
TopicAdipose Tissue and Metabolism
Canadian institutionsnot available
FundersCanadian Institutes of Health ResearchMcMaster University
KeywordsStem cellNeuroscienceSignal transductionObesityFunction (biology)BiologyCell biologyMedicineBioinformaticsEndocrinology
DOInot available

Abstract

fetched live from OpenAlex

Obesity is a major health problem, and it is increasing at an alarming pace in developed and developing countries worldwide. Obesity increases the likelihood for many other diseases, such as type 2 diabetes, coronary heart disease, metabolic syndrome, hyperlipidemia, and some types of cancer. Chronic calorie-overload, genetic predisposition, and physical inactivity are the primary factors contributing to energy imbalance during obesity. In response to a positive energy balance, adipose tissues start expanding to store excessive nutrients in the form of lipids via two mechanisms: 1) by recruiting more adipocyte progenitors, resulting in increased adipocyte number – adipocyte hyperplasia; and 2) through an excessive accumulation of lipids in existing adipocytes – adipocyte hypertrophy. The former process is considered a metabolically healthy way to expand adipose tissue, while the latter is associated with the development of complications, such as insulin resistance. During conditions of chronic energy excess, as is found in obesity, adipose tissue loses its ability to recruit/activate progenitors, and adipose tissue expansion occurs primarily through adipocyte hypertrophy, ultimately resulting in inflamed and dysfunctional adipose tissue. Although studies have looked at hypertrophic and hyperplastic processes during adipocyte development, we still lack a meaningful understanding of the molecular mechanisms contributing to the reduced adipogenesis observed in obesity. In this thesis, I created a metabolic map of healthy and obese human adipogenesis in vitro by using global transcriptomics, proteomics and functional cellular bioenergetics tools, providing a more systematic understanding of normal and obesity-influenced human adipogenesis. I isolated and characterized adipose tissue-resident stem cells (ADSCs) from different healthy, overweight, and obese individuals to create an in vitro model for studying obesity. I found that cells from morbidly obese individuals inherently retained obesity-associated metabolic derangements, and hence, can serve as a cellular model that is very well-suited to study the factors contributing to the reduced adipogenesis that is observed in the context of obesity. By utilizing this model, I identified metabolic aberrations at molecular and functional levels in the two major cellular energy-generating pathways, glycolysis and oxidative phosphorylation. I demonstrate that these pathways drive impaired stem cell function during adipogenesis in obese patient-derived ADSCs. Further, I was able to rescue impaired stem cell function and adipogenesis by stimulating metabolism and improving mitochondrial health in obese cells. In addition, through “omics” approaches, I identified a number of signaling pathways that are aberrantly regulated during obese versus healthy adipogenesis. One such pathway, which was prominently dysregulated in obese cells was the Wnt signaling pathway, wherein observed dynamic changes in Wnt antagonist expression, required for normal adipogenesis, did not occur in these cells. Functional studies revealed that aberrant Wnt signaling closely associated with defects in metabolism, which paralleled my earlier observations obtained through functional metabolic studies in obese cells, suggesting that cellular metabolism can be potentially targeted to improve stem cell function in obese cells. Building on that notion, I developed and validated a novel high-throughput functional drug-screening assay targeting obese adipogenesis, based on functional measurements of metabolic parameters such as mitochondrial activity and induction of the browning of white adipocytes. Overall, this study presents novel insights into the mechanisms that modulate human adipogenic differentiation in obesity, by using disease-relevant in vitro models that can serve as a platform for the discovery of novel therapeutics, offering the opportunity to identify novel targetable pathways and biomarkers for the management of obesity and its associated metabolic complications.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Other design · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.668
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0070.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.216
Teacher spread0.195 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designOther design
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

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