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Record W2991255010 · doi:10.1101/846964

Classification and Analysis of Minimally-Processed Data from a Large Magnetoencephalography Dataset using Convolutional Neural Networks

2019· preprint· en· W2991255010 on OpenAlexaff
Jon Garry, Thomas Trappenberg, Steven Beyea, Timothy Bardouille

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2019
Typepreprint
Languageen
FieldNeuroscience
TopicNeural dynamics and brain function
Canadian institutionsDalhousie University
FundersBiotechnology and Biological Sciences Research CouncilMedical Research CouncilUniversity of Cambridge
KeywordsMagnetoencephalographyComputer scienceConvolutional neural networkArtificial intelligencePattern recognition (psychology)Artificial neural networkCued speechMachine learningElectroencephalography

Abstract

fetched live from OpenAlex

Abstract Convolutional neural networks were used to classify and analyse a large magnetoencephalography (MEG) dataset. Networks were trained to classify between active and baseline intervals of minimally-processed data recorded during cued button pressing. There were two primary objectives for this study: (1) develop networks that can effectively classify MEG data, and (2) identify the important data features that inform classification. Networks with a simple architecture were trained using sensor and source-localised data. Networks trained with sensor data were also trained using varying amounts of data. The important features within the data were identified via saliency and occlusion mapping. An ensemble of networks trained using sensor data performed best (average test accuracy 0.974 ± 0.001). A dataset containing on the order of hundreds of participants was required for optimal performance of this network with these data. Visualisation maps highlighted features known to occur during neuromagnetic recordings of cued button pressing.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.009
Threshold uncertainty score0.017

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.052
GPT teacher head0.266
Teacher spread0.213 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2019
Admission routes1
Has abstractyes

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