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Record W2996428715 · doi:10.1111/mec.15329

Ancient DNA suggests modern wolves trace their origin to a Late Pleistocene expansion from Beringia

2019· article· en· W2996428715 on OpenAlexafffund
Liisa Loog, Olaf Thalmann, Mikkel‐Holger S. Sinding, Verena J. Schuenemann, Angela Perri, Mietje Germonpré, Hervé Bocherens, Kelsey E. Witt, Jose A. Samaniego Castruita, Marcela Sandoval‐Velasco, Inge Lundstrøm, Nathan Wales, Gontran Sonet, Laurent Frantz, Hannes Schroeder, Jane Budd, Elodie‐Laure Jimenez, Sergey Fedorov, Boris Gasparyan, Andrew W. Kandel, Martina Lázničková‐Galetová, Hannes Napierala, Hans-Peter Uerpmann, Pavel A. Nikolskiy, Elena Y. Pavlova, Vladimir V. Pitulko, Karl‐Heinz Herzig, Ripan S. Malhi, Eske Willerslev, Anders J. Hansen, Keith Dobney, M. Thomas P. Gilbert, Johannes Krause, Greger Larson, Anders Eriksson, Andrea Manica

Bibliographic record

VenueMolecular Ecology · 2019
Typearticle
Languageen
FieldEnvironmental Science
TopicWildlife Ecology and Conservation
Canadian institutionsSimon Fraser University
FundersH2020 European Research CouncilNatural Environment Research CouncilUniversity of AlbertaH. Lundbeck A/SMax-Planck-GesellschaftLundbeckfondenHorizon 2020 Framework ProgrammeAage og Johanne Louis-Hansens FondGrantová Agentura České RepublikySight Research UKMuseum of the North, University of AlaskaRussian Science FoundationVelux Fonden
KeywordsBeringiaAncient DNABiologyPleistoceneTRACE (psycholinguistics)Trace fossilArchaeologyPaleontologyEvolutionary biologyPopulationHistory

Abstract

fetched live from OpenAlex

Grey wolves (Canis lupus) are one of the few large terrestrial carnivores that have maintained a wide geographical distribution across the Northern Hemisphere throughout the Pleistocene and Holocene. Recent genetic studies have suggested that, despite this continuous presence, major demographic changes occurred in wolf populations between the Late Pleistocene and early Holocene, and that extant wolves trace their ancestry to a single Late Pleistocene population. Both the geographical origin of this ancestral population and how it became widespread remain unknown. Here, we used a spatially and temporally explicit modelling framework to analyse a data set of 90 modern and 45 ancient mitochondrial wolf genomes from across the Northern Hemisphere, spanning the last 50,000 years. Our results suggest that contemporary wolf populations trace their ancestry to an expansion from Beringia at the end of the Last Glacial Maximum, and that this process was most likely driven by Late Pleistocene ecological fluctuations that occurred across the Northern Hemisphere. This study provides direct ancient genetic evidence that long-range migration has played an important role in the population history of a large carnivore, and provides insight into how wolves survived the wave of megafaunal extinctions at the end of the last glaciation. Moreover, because Late Pleistocene grey wolves were the likely source from which all modern dogs trace their origins, the demographic history described in this study has fundamental implications for understanding the geographical origin of the dog.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.376
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.207
Teacher spread0.200 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations116
Published2019
Admission routes2
Has abstractyes

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