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Record W2998158849 · doi:10.1109/access.2019.2961630

Automated Brain Tumor Segmentation Based on Multi-Planar Superpixel Level Features Extracted From 3D MR Images

2019· article· en· W2998158849 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueIEEE Access · 2019
Typearticle
Languageen
FieldNeuroscience
TopicBrain Tumor Detection and Classification
Canadian institutionsUniversity of Saskatchewan
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsArtificial intelligencePattern recognition (psychology)HistogramComputer scienceSegmentationConsistency (knowledge bases)Image segmentationPixelFeature (linguistics)Image (mathematics)

Abstract

fetched live from OpenAlex

Brain tumor segmentation from Magnetic Resonance Imaging (MRI) is of great importance for better tumor diagnosis, growth rate prediction and radiotherapy planning. But this task is extremely challenging due to intrinsically heterogeneous tumor appearance, the presence of severe partial volume effect and ambiguous tumor boundaries. In this work, a unique approach of tumor segmentation is introduced based on superpixel level features extracted from all three planes (x -y, y - z, and z - x) of 3D volumetric MR images. In order to avoid the pixel randomness and to account for precise inhomogeneous boundaries of brain tumor, each of the images belonging to a particular plane is partitioned into irregular patches (superpixels) based on their intensity and spatial similarity. Next, various statistical and textural features are extracted from each superpixel where all three planes are considered separately in order to obtain better labeling on superpixels in tumor edges. A feature selection scheme is proposed based on their performance on histogram based consistency analysis and local descriptor pattern analysis, which offers a significant reduction in feature dimension without sacrificing classification performance. For the purpose of supervised classification, Extremely Randomized Trees is used to classify these superpixels into a tumor or a non-tumor class. Finally, pixel level decision is taken based on corresponding decisions obtained in each plane. Extensive simulations are carried out on publicly available dataset and it is found that the proposed method offers better tumor segmentation performance in comparison to that obtained by some state of the art methods.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.286
Threshold uncertainty score0.857

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.063
GPT teacher head0.330
Teacher spread0.267 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it