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Record W2999295875 · doi:10.1093/rheumatology/kez615

Clinical and associated inflammatory biomarker features predictive of short-term outcomes in non-systemic juvenile idiopathic arthritis

2019· article· en· W2999295875 on OpenAlexafffund
Elham Rezaei, Daniel J. Hogan, Brett Trost, Anthony Kusalik, Gilles Boire, David A. Cabral, Sarah Campillo, Gaëlle Chédeville, Anne-Laure Chetaille, Paul Dancey, Ciarán M. Duffy, Karen Watanabe Duffy, John Gordon, Jaime Guzmán, Kristin Houghton, Adam M. Huber, Roman Juřenčák, Bianca Lang, Kimberly Morishita, Kiem Oen, Ross E. Petty, Suzanne Ramsey, Rosie Scuccimarri, Lynn Spiegel, Elizabeth Stringer, Regina M. Taylor‐Gjevre, Shirley M. L. Tse, Lori B. Tucker, Stuart E. Turvey, Susan Tupper, Rae S. M. Yeung, Susanne M. Benseler, Janet Ellsworth, Chantal Guillet, Chandima Karananayake, Nazeem Muhajarine, Johannes Roth, Rayfel Schneider, Alan Rosenberg

Bibliographic record

VenueLara D. Veeken · 2019
Typearticle
Languageen
FieldMedicine
TopicAutoimmune and Inflammatory Disorders Research
Canadian institutionsUniversity of AlbertaHôpital FleurimontUniversity of CalgaryChildren's Hospital of Eastern OntarioUniversité de SherbrookeUniversity of TorontoDalhousie UniversityBC Children's HospitalUniversity of ManitobaIzaak Walton Killam Health CentreCentre hospitalier universitaire de QuébecJaneway Children's Health and Rehabilitation CentreMcGill University Health CentreHospital for Sick ChildrenUniversity of Saskatchewan
FundersInstitute of Musculoskeletal Health and ArthritisInstitute of Infection and ImmunityCanadian Institutes of Health ResearchCanadian Arthritis NetworkArthritis SocietyUniversity of SaskatchewanUniversity of British ColumbiaMcGill University
KeywordsMedicineBiomarkerInternal medicineCohortProspective cohort studyArthritisDiseaseArea under the curve

Abstract

fetched live from OpenAlex

OBJECTIVE: To identify early predictors of disease activity at 18 months in JIA using clinical and biomarker profiling. METHODS: Clinical and biomarker data were collected at JIA diagnosis in a prospective longitudinal inception cohort of 82 children with non-systemic JIA, and their ability to predict an active joint count of 0, a physician global assessment of disease activity of ≤1 cm, and inactive disease by Wallace 2004 criteria 18 months later was assessed. Correlation-based feature selection and ReliefF were used to shortlist predictors and random forest models were trained to predict outcomes. RESULTS: From the original 112 features, 13 effectively predicted 18-month outcomes. They included age, number of active/effused joints, wrist, ankle and/or knee involvement, ESR, ANA positivity and plasma levels of five inflammatory biomarkers (IL-10, IL-17, IL-12p70, soluble low-density lipoprotein receptor-related protein 1 and vitamin D), at enrolment. The clinical plus biomarker panel predicted active joint count = 0, physician global assessment ≤ 1, and inactive disease after 18 months with 0.79, 0.80 and 0.83 accuracy and 0.84, 0.83, 0.88 area under the curve, respectively. Using clinical features alone resulted in 0.75, 0.72 and 0.80 accuracy, and area under the curve values of 0.81, 0.78 and 0.83, respectively. CONCLUSION: A panel of five plasma biomarkers combined with clinical features at the time of diagnosis more accurately predicted short-term disease activity in JIA than clinical characteristics alone. If validated in external cohorts, such a panel may guide more rationally conceived, biologically based, personalized treatment strategies in early JIA.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.008
Threshold uncertainty score0.727

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.311
Teacher spread0.291 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations22
Published2019
Admission routes2
Has abstractyes

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