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Record W3000523688

Chemical Profiling of Five Canadian Haskap Berry Varieties and the Roles of their Phenolic Extracts in Modulating Cellular Stress in Human Fibroblasts

2020· dissertation· en· W3000523688 on OpenAlex
Lily R. Zehfus

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

aboutThe title or abstract carries a Canadian signal from the geographic lexicon.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueUniversity Library (University of Saskatchewan) · 2020
Typedissertation
Languageen
FieldMedicine
TopicPhytochemicals and Antioxidant Activities
Canadian institutionsnot available
Fundersnot available
KeywordsProfiling (computer programming)BerryChemistryTraditional medicineBiologyBotanyMedicineComputer science
DOInot available

Abstract

fetched live from OpenAlex

Interest in plant phenolic structure(s) and their applications has grown due to their potent antioxidant and nutraceutical potential. Many plant species produce phenolics for a variety of functions, with high levels of these compounds often found in berry fruits. When applied to cells and organisms, berry fruit phenolics have shown anti-aging, anticancer, and anti-inflammatory activities. Haskap berries (Lonicera caerulea) are an edible honeysuckle species that contain very high levels of phenolics when compared to other commercial fruits. In this study, the chemical and physicochemical composition of five Canadian haskap berry varieties (Aurora, Blizzard, Honey Bee, Indigo Gem, and Tundra) was determined, with a focus on phenolic analysis and the in vitro health-promoting potential of these compounds. Total phenolic chromatographic indices (TPCI) using high performance liquid chromatography with photodiode array detection (HPLC-PDA) identified anthocyanins as the major phenolic subclass with cyanidin-3-O-glucoside, cyanidin-3,5-O-diglucoside, and cyanidin-3-O-rutinoside being the most prevalent. HPLC-tandem mass spectrometry (HPLC-MS/MS) was also employed to identify haskap phenolic structures including three previously unreported phenolic compounds. In vitro free radical scavenging assays showed that these haskap varieties had higher radical scavenging abilities than many other fruits (e.g. blueberry) with the Tundra variety demonstrating the highest capacity. These experiments led to selection of the Tundra variety for use in tissue culture assays due to its high phenolic content and free radical scavenging abilities. Phenolic extracts and fractions from Tundra haskap berries were produced using solid phase extraction, so as to separate phenolic subclasses for comparative cell line treatments in vitro.\nIn tissue culture assays, phenolic extracts from the Tundra variety slowed the growth of fibroblasts isolated from healthy donors (2DD) and immortalized (NB1 hTERT) fibroblasts without inducing cell death, indicating potential biological impacts similar to resveratrol, a fruit phenolic known to promote cellular health. Tundra phenolic fractions also increased cellular protein and activity levels of Sirtuin-1 (SIRT1), decreased levels of the pro-inflammatory phospho-nuclear factor kappa B (phospho-NF-κB p65) and the phosphorylated mammalian target of rapamycin (phospho-mTOR), and increased nuclear factor erythroid 2 (Nrf2). These observations are significant as these activities have been linked to slowed aging, improved intracellular radical scavenging (resistance to oxidative stress), and decreased inflammatory responses. Tundra phenolic fraction activities were shown to rely primarily on SIRT1 by employing lentiviral and siRNA SIRT1 knockdown cells, with additional SIRT1-independent mechanism(s) related to Nrf2 upregulation. These fractions also showed the ability to decrease transcript levels of select pro-inflammatory cytokines and antioxidant enzymes, demonstrating further anti-inflammatory activities along with decreased requirements for cellular antioxidant mechanisms. These experimental results indicated that Saskatchewan-bred haskaps have the potential to promote health in vitro by mediating cellular stress responses and may be candidates for use as nutraceutical supplements.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.296
Threshold uncertainty score0.975

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.173
Teacher spread0.167 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it