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Record W3012321853 · doi:10.1002/hep.31241

Letter to the Editor: Emergence of Zoonotic Rat Hepatitis E Virus Infection

2020· letter· en· W3012321853 on OpenAlexaboutno aff
Cornelia Adlhoch, Sally A. Baylis

Bibliographic record

VenueHepatology · 2020
Typeletter
Languageen
FieldMedicine
TopicHepatitis Viruses Studies and Epidemiology
Canadian institutionsnot available
Fundersnot available
KeywordsHepatitis E virusSerologyHepatitis EVirologyMedicineImmunologyAntibodyBiologyGenotype

Abstract

fetched live from OpenAlex

To the Editor: We noted the identification of further rat hepatitis E virus (HEV) cases in humans in Hong Kong.(1) This emergence, infection of a Canadian United Nations worker in Africa,(2) and serological evidence of exposure in German foresters(3) and hospitalized Vietnamese patients(4) raises the question of how widespread rat HEV infection is globally. Rat HEV (Orthohepevirus C or HEV-C) is distinct from epidemic HEV strains circulating in Africa, Asia, and to zoonotic pig strains responsible for disease burden in industrialized countries (Orthohepevirus A or HEV-A). In Europe, hepatitis E is not notifiable, and, until recently, lack of awareness by physicians and poorly standardized diagnostics led to underreporting. In 2019, the European Centre for Disease Prevention and Control developed guidance on HEV surveillance (data collection/reporting, case definitions, and testing)(5); this and other guidelines do not currently consider HEV-C. Despite similar clinical presentation of HEV-C and HEV-A (acute and chronic), molecular assays used clinically and for blood donor screening do not detect HEV-C. A commonly used anti-immunoglobulin M (IgM) assay can detect anti-HEV-C antibodies; however, HEV-A/HEV-C-discriminatory assays are unavailable. Of the 169 anti-IgM-positive patients, Sridhar et al. identified 5 HEV-C1 and 82 HEV-A RNA-positive patients.(1) Is more data on the remaining 82 HEV-IgM-positive/RNA-negative patients available? Could variability of HEV-C strains contribute to missed cases? There is a need to develop specific molecular and serological assays and associated control materials for HEV-C, to assess case frequency in previously healthy immunocompetent as well as immunosuppressed individuals and understand the risk to humans. Zoonotic HEV-A is transmitted primarily through consumption of contaminated meat. While Sridhar et al. mentioned the proximity of the HEV-C-infected patients to rat infestations and droppings, there was no discussion about possible transmission of HEV-C by consumption of rat meat or contaminated meat products. More detailed epidemiological investigations (environmental risk factors, consumption habits, and water contamination) are needed to identify infection sources and transmission patterns.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.212
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.041
GPT teacher head0.297
Teacher spread0.257 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2020
Admission routes1
Has abstractyes

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