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Record W3014729016 · doi:10.22215/etd/2019-13811

The Impact of Bacteriophage on the Aging Brain and Inflammatory Response: Relevance to Parkinson’s Disease

2019· dissertation· en· W3014729016 on OpenAlexaff
Sheryl Beauchamp

Bibliographic record

Venuenot available
Typedissertation
Languageen
FieldNeuroscience
TopicNeuroinflammation and Neurodegeneration Mechanisms
Canadian institutionsCarleton University
Fundersnot available
KeywordsDysbiosisInflammationImmunologyDiseaseStimulus (psychology)BacteriophageMicrobiomeParkinson's diseaseMedicineBiologyGut floraInternal medicinePsychologyBioinformaticsEscherichia coliGenetics

Abstract

fetched live from OpenAlex

Parkinson's disease (PD) is associated with age and inflammation.New studies have found a link between gut dysbiosis and the prevalence of PD.Phage 936, which is found in dairy products, has been associated with disruptions in the gut microbiome and leaky gut causalities.The present thesis sought to assess the impact of phage 936 in young or old mice and whether the virus augments or diminishes the impact of an inflammatory (LPS) stimulus.To this end, an initial study was conducted to first determine if bacteriophage alone could actually produce some degree of measurable changes (e.g.neutrophil mobilization or change in cytokine or other circulating immune factors) within the brain.The main study of this thesis then involved young (4-5 months) vs old (15-16 months) mice receiving the phage 936 (or vehicle), followed by LPS (or vehicle) treatment.We then assessed peripheral gut and brain inflammatory changes, as well as assessed motor functioning and sickness.We hypothesized that the old mice that received both the LPS and phage 936 would display the greatest degree of inflammatory and neuronal pathology.However, it is possible that the bacteriophage would diminish the impact of LPS given that phages can neutralize endogenous bacteria and hence, might limit the inflammatory profile.Our findings provide evidence that phage alone does cause measurable changes in inflammatory biomarkers, both peripherally and centrally.We also determined that phage 936 caused behavioral changes, as evidenced by sickness scores and weight loss.It could therefore be concluded that our hypothesis was reasonable; both LPS and age did exacerbate the immunological changes produced by phage, thus producing detectable pathology in mice.We present for the first time, that phage 936, in aged mice may have complex effects that vary with the presence of inflammation (e.g.induced by LPS).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.291
Teacher spread0.273 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

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