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Transcriptional regulations induced by estradiol and intermittent hypoxia in the lungs of ovariectomized female rats.

2020· article· en· W3016786924 on OpenAlexaff
Alexandra Jochmans‐Lemoine, Alexandra Ribon‐Demars, Gauthier Ganouna, François Marcouiller, Vincent Pialoux, Aïda Bairam, Vincent Joseph

Bibliographic record

VenueThe FASEB Journal · 2020
Typearticle
Languageen
FieldMedicine
TopicObstructive Sleep Apnea Research
Canadian institutionsUniversité LavalInstitut universitaire de cardiologie et de pneumologie de Québec
Fundersnot available
KeywordsOvariectomized ratIntermittent hypoxiaOxidative stressEndocrinologyDownregulation and upregulationInternal medicineHypoxia (environmental)ReceptorGene expressionMedicineObstructive sleep apneaChemistryBiologyGeneHormoneBiochemistry

Abstract

fetched live from OpenAlex

Intermittent hypoxia (IH) leads to oxidative stress and inflammation contributing to tissue and cellular dysfunctions in sleep apnea patients. We showed that estradiol (E 2 ) reduces oxidative stress markers in the brain and aorta of female rats exposed to IH (model of sleep apnea), but it remains unknown if the effects of E 2 in IH occur in other tissues such as the lungs, in which E 2 receptors are present. Interestingly, both IH and E 2 receptors act through specific transcription factors, changing the expression of target genes, and potential interactions between these transcription networks are not known. We therefore asked if IH exposure induces oxidative stress and alters the gene expression pattern in the lungs of ovariectomized female rats, and if E 2 supplementation prevents these effects. Female Sprague‐Dawley rats were ovariectomized (OVX) and implanted with osmotic minipumps delivering vehicle (OVX‐VEH), or E 2 (0.5 mg/kg/day). Two weeks following surgery, the rats were exposed to room air (RA), or IH for 7 days (nadir 10% O 2 , 10 cycles/hour, 8 hours/day). Lung samples were used to measure the oxidative stress marker AOPP (Advanced Oxidation of Protein Products) and determine the gene expression profiles (RNA microarray, ThermoFisher Clariom S rat assay). In OVX‐VEH female rats, E 2 treatment, but not the IH exposure, increased AOPP level. In OVX‐Veh rats, IH upregulated the expression of 11 genes and down regulated 5 genes, none of these genes are involved in oxidative stress. E 2 in RA rats upregulated 130 genes and downregulated 112 genes including CYP1a1, a cytochrome involved in production of reactive oxygen species. In rats treated with E 2 , the IH exposure increased the expression levels of 270 genes and decreased the expression of 828 genes (including anti‐oxidant genes). We conclude that in the lungs of OVX female rats, IH has only limited effects on oxidative stress and on genes transcriptional pattern. E 2 treatment under RA conditions apparently increases oxidative stress and has more important transcriptional effects than IH exposure. Finally, E 2 treatment has profound effects on the transcriptional response to IH exposure, and helps controlling the oxidative stress response. This important interaction between E 2 and IH might be relevant to better understand the cellular responses to IH and sleep apnea in women. Support or Funding Information Supported by CIHR.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.046
GPT teacher head0.293
Teacher spread0.247 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2020
Admission routes1
Has abstractyes

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