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Record W3020367139 · doi:10.1094/php-12-19-0088-rs

Fungi Associated with Damage Observed on Branches of <i>Juglans nigra</i> in Indiana, Missouri, and Tennessee

2020· article· en· W3020367139 on OpenAlexaff
Margaret E. McDermott-Kubeczko, Jennifer Juzwik, Sharon E. Reed, William E. Klingeman

Bibliographic record

VenuePlant Health Progress · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsOntario Forest Research Institute
FundersAnimal and Plant Health Inspection ServiceU.S. Forest ServiceNational Institute of Food and AgricultureU.S. Department of Agriculture
KeywordsJuglansBiologyBotryosphaeria dothideaBark (sound)Crown (dentistry)BotanyWoody plantHorticultureFusarium solaniEcology

Abstract

fetched live from OpenAlex

Branch and stem cankers caused by Geosmithia morbida associated with mass attack by its primary insect vector (Pityophthorus juglandis) result in thousand cankers disease (TCD) on Juglans and Pterocarya species. Because other fungi and insects can cause visible damage to Juglans nigra, a baseline assessment was performed to document damage types present and to characterize fungi associated with each type. Two branches were collected from trees with visually healthy crowns in TCD-free locations (Indiana and Missouri) and two branches from trees with and without crown symptoms characteristic of TCD within the disease range in Tennessee. In most cases, one of the two branches was girdled at the base 3 to 4 months prior to harvest. Outer bark was peeled from branch subsamples, observed damage characterized, and isolation of fungi from each damage type attempted. Three known pathogens of J. nigra were obtained from different damage types: G. morbida, in Tennessee only; Botryosphaeria dothidea, in Indiana and Tennessee; and Fusarium solani (= members of F. solani species complex), in all three states. The latter two fungi may exacerbate branch dieback and mortality of TCD-affected trees. These results will be of value to plant health specialists monitoring J. nigra in the field and laboratory diagnosticians processing survey samples.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.187
Threshold uncertainty score0.372

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.030
GPT teacher head0.240
Teacher spread0.209 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2020
Admission routes1
Has abstractyes

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