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Record W3023012939 · doi:10.29267/mxjb.2020.5.2.120

Genetic structure of Platanus mexicana var. mexicana (Platanaceae) in southern Mexico

2020· article· en· W3023012939 on OpenAlexaff
Dulce María Galván‐Hernández, Pablo Octavio‐Aguilar, Óscar Carmona-Hernández, Hugo Asselin, Josè Armando Lozada-García

Bibliographic record

VenueMexican Journal of Biotechnology · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsUniversité du Québec en Abitibi-Témiscamingue
Fundersnot available
KeywordsGene flowBiologyGenetic structurePopulationInterspecific competitionEcologyGeographyGenetic variationGeneGeneticsDemography

Abstract

fetched live from OpenAlex

Platanus mexicana is a typical species of the tropical cloud forest with a complex biogeographical history. High adaptive radiation and interspecific hybridization have been reported for this species, leading to high genetic variability and low differentiation. However, previous studies have shown that populations in the southern part of the species’ distribution in Mexico show different patterns. Therefore, this research aimed at characterizing the genetic structure of three Platanus mexicana populations in southern Mexico. The results revealed significant differences between the populations in Oaxaca, Veracruz and Chiapas (FST = 0.235 ± 0.08), whereas there was evidence of gene flow between the two northwestern populations (Nm = 1.5). Bayesian analysis of allele frequencies showed high selection pressure in Veracruz. Furthermore, the alleles that shifted away from the neutral model were overrepresented in Chiapas. The Oaxaca population had the highest genetic variability values (He = 0.25; P = 68.7), whereas the Chiapas population displayed the highest differentiation (Nei = 0.134). Considering the biogeographical history and topographic heterogeneity of the region, the results suggest three differentiation processes: presence of a climate refugium in Oaxaca, allopatry between Veracruz and Oaxaca, and vicariance in Chiapas.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.023
Threshold uncertainty score0.047

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.209
Teacher spread0.200 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

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