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Record W3023017055 · doi:10.1038/ejhg.2011.25

Strengthening the reporting of genetic risk prediction studies: the GRIPS statement

2011· article· en· W3023017055 on OpenAlexaff
A. Cecile J.W. Janssens, John P. A. Ioannidis, Cornelia M. van Duijn, Julian Little, Muin J. Khoury

Bibliographic record

VenueEuropean Journal of Human Genetics · 2011
Typearticle
Languageen
FieldDecision Sciences
TopicMeta-analysis and systematic reviews
Canadian institutionsUniversity of Ottawa
FundersNational Center for Research ResourcesCenters for Disease Control and PreventionU.S. Department of Health and Human ServicesNational Institutes of HealthErasmus Universitair Medisch Centrum RotterdamNederlandse Organisatie voor Wetenschappelijk Onderzoek
KeywordsChecklistTransparency (behavior)Multidisciplinary approachStatement (logic)Public healthDocumentationRisk assessmentMedicineData scienceComputer sciencePsychologyPolitical sciencePathology

Abstract

fetched live from OpenAlex

The rapid and continuing progress in gene discovery for complex diseases is fueling interest in the potential application of genetic risk models for clinical and public health practice. The number of studies assessing the predictive ability is steadily increasing, but the quality and completeness of reporting varies. A multidisciplinary workshop sponsored by the Human Genome Epidemiology Network developed a checklist of 25 items recommended for strengthening the reporting of Genetic RIsk Prediction Studies, building on the principles established by previous reporting guidelines. These recommendations aim to enhance the transparency of study reporting, and thereby to improve the synthesis and application of information from multiple studies that might differ in design, conduct, or analysis. A detailed Explanation and Elaboration document is published on the EJHG website.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.792
metaresearch head score (Gemma)0.877
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Reporting · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.208
Threshold uncertainty score0.257

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.7920.877
Meta-epidemiology (narrow)0.0050.009
Meta-epidemiology (broad)0.0100.017
Bibliometrics0.0190.022
Science and technology studies0.0050.013
Scholarly communication0.0130.017
Open science0.0140.021
Research integrity0.0330.035
Insufficient payload (model declined to judge)0.0050.005

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.822
GPT teacher head0.505
Teacher spread0.317 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designTheoretical or conceptual
DomainReporting
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations20
Published2011
Admission routes1
Has abstractyes

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