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Record W3024552635 · doi:10.1163/22244662-bja10008

Slope aspect influences soil microbial community structure and composition in the Israel arid Mediterranean

2020· article· en· W3024552635 on OpenAlexaff
Itumeleng Moroenyane, Binu M. Tripathi, Jonathan M. Adams, Sherman Chen, Yosef Steinberger

Bibliographic record

VenueIsrael Journal of Ecology and Evolution · 2020
Typearticle
Languageen
FieldEnvironmental Science
TopicMicrobial Community Ecology and Physiology
Canadian institutionsInstitut National de la Recherche Scientifique
Fundersnot available
KeywordsEcologyMicrobial population biologyOrganic matterCommunity structureActinobacteriaMediterranean climateEcosystemBiologyAbiotic componentSoil organic matterWater contentMicrobial ecologyMicrobiomeEnvironmental scienceSoil water16S ribosomal RNAGeology

Abstract

fetched live from OpenAlex

Abstract Microbial biogeographical patterns in Mediterranean ecosystems are becoming widely documented; however, the influences of slope aspect on the microbial community composition and structure are poorly understood. This study tested the hypotheses that slope aspect and organic matter content would influence microbial diversity patterns and distribution. Sets of five soil samples were collected from different slope aspects (north slope, south slopes, and valley bottom) and bacterial and fungal communities were examined using the 16S rRNA gene and ITS1 region sequencing, respectively, on the Illumina HiSeq platform. Organic matter and soil moisture varied significantly across all sites but did not influence microbial diversity patterns. Community structure (Bray-Curtis dissimilarity) indicated that each site had a distinct microbial community, and soil moisture along with organic matter modulated the community structure. Relative abundance of key bacterial taxa ( Actinobacteria and Bacteriodetes ) and fungal taxa ( Ascomycota was significantly influenced by slope aspect. Our results show, for the first time, that the often reported slope aspect dynamics of the soil microbiomes do in fact influence bacterial and fungal community composition and structure. Overall, taken together with previous studies from the region, this study provides novel insight on the physio-chemical properties that modulate the biogeographical patterns of soil microbes and contributes to our knowledge of factors that mediate microbial ecology in Mediterranean ecosystems.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.232
Teacher spread0.215 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2020
Admission routes1
Has abstractyes

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Same venueIsrael Journal of Ecology and EvolutionSame topicMicrobial Community Ecology and PhysiologyFrench-language works237,207