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Record W3031927513 · doi:10.1101/2020.06.01.127415

Trends and gaps in the use of citizen science derived data as input for species distribution models: a quantitative review

2020· review· en· W3031927513 on OpenAlexafffund
Mariano J. Feldman, Louis Imbeau, Philippe Marchand, Marc J. Mazerolle, Marcel Darveau, Nicole J. Fenton

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2020
Typereview
Languageen
FieldEnvironmental Science
TopicSpecies Distribution and Climate Change
Canadian institutionsDucks Unlimited CanadaUniversité LavalCentre de Géomatique du QuébecUniversité du Québec en Abitibi-Témiscamingue
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsCitizen scienceTaxonScope (computer science)GeographyDistribution (mathematics)Data scienceEcologyRegional scienceLibrary scienceComputer scienceBiology

Abstract

fetched live from OpenAlex

Abstract Citizen science (CS) currently refers to some level of volunteer participation in any discipline of scientific research. Over the last two decades, nature-based CS has flourished due to innovative technology, novel devices, and widespread digital platforms used to collect and classify species occurrence data. For scientists, CS offers a low-cost approach of collecting species occurrence information at large spatial scales that otherwise would be prohibitively expensive. We examined the trends and gaps linked to the use of CS as a source of data for species distribution models (SDMs), in order to propose guidelines and highlight solutions. We conducted a quantitative literature review of 224 peer-reviewed articles to measure how the representation of different taxa, regions, and data types have changed in SDM publications since the 2010s. Our review shows that the number of papers using CS for SDMs has increased at approximately double the rate of the overall number of SDM papers. However, disparities in taxonomic and geographic coverage remain in studies using CS. Western Europe and North America were the regions with the most coverage (71.2%). Papers on birds (51.2%) and mammals (26.2%) outnumbered other taxa. Among invertebrates, flying insects including Lepidoptera and Odonata received the most attention. Compared to studies on animal taxa, papers on plants using CS data remain rare. Although the aims and scope of SDM papers are diverse, conservation remained the central theme of SDM using CS data. We present examples of the use of CS and highlight recommendations to motivate further research, such as combining multiple data sources and promoting local and traditional knowledge. We hope our findings will strengthen citizen-researchers partnerships to better inform SDMs, especially for less-studied taxa and regions. Researchers stand to benefit from the large quantity of data available from CS sources to improve global predictions of species distributions.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.045
metaresearch head score (Gemma)0.210
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch, Open science
Consensus categoriesnone
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Systematic review · Consensus signal: Systematic review
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.998
Threshold uncertainty score0.236

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0450.210
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0040.004
Bibliometrics0.0260.026
Science and technology studies0.0010.002
Scholarly communication0.0060.007
Open science0.0020.002
Research integrity0.0030.002
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.178
GPT teacher head0.323
Teacher spread0.146 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designSystematic review
DomainMethods
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations10
Published2020
Admission routes2
Has abstractyes

Explore more

Same venuebioRxiv (Cold Spring Harbor Laboratory)→Same topicSpecies Distribution and Climate Change→French-language works237,207→