MétaCan
Menu
← Back to cohort
Record W3037051595 · doi:10.1101/2020.06.26.173286

Population genomic and historical analysis reveals a global invasion by bridgehead processes in <i>Mimulus guttatus</i>

2020· preprint· en· W3037051595 on OpenAlexaff
Mario Vallejo‐Marín, Jannice Friedman, Alex D. Twyford, Olivier Lepais, Stefanie M. Ickert‐Bond, Matthew A. Streisfeld, Levi Yant, Mark van Kleunen, Michael C. Rotter, Joshua R. Puzey

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2020
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsQueen's University
FundersNatural Environment Research CouncilMuseum of the North, University of AlaskaUniversité de Pau et des Pays de l'AdourUniversité de BordeauxUniversity of OregonUniversity of StirlingBotanical Society of Britain and IrelandEuropean CommissionNational Geographic Society
KeywordsBiologyRange (aeronautics)EcologyInvasive speciesBiodiversityPopulationIntroduced speciesGeographyGenealogyEvolutionary biologyDemographyHistory

Abstract

fetched live from OpenAlex

Abstract Humans are transforming species ranges worldwide. While artificial translocations trigger biological invasions with negative effects on biodiversity, invasions provide exceptional opportunities to generate ecological and evolutionary hypotheses. Unfortunately, imperfect historical records and exceedingly complex demographic histories present challenges for the reconstruction of invasion histories. Here we combine historical records, extensive worldwide and genome-wide sampling, and demographic analyses to investigate the global invasion of yellow monkeyflowers ( Mimulus guttatus ) from North America to Europe and the Southwest Pacific. By sampling 521 plants from 158 native and introduced populations genotyped at >44,000 loci, we determined that invasive North American M. guttatus was first likely introduced to the British Isles from the Aleutian Islands (Alaska), followed by rapid admixture from multiple parts of the native range. Populations in the British Isles then appear to have served as a bridgehead for vanguard invasions worldwide into the rest of Europe, New Zealand and eastern North America. Our results emphasise the highly admixed nature of introduced M. guttatus and demonstrate the potential of introduced populations to serve as sources of secondary admixture, producing novel hybrids. Unravelling the history of biological invasions provides a starting point to understand how invasive populations adapt to novel environments.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.217
Teacher spread0.203 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2020
Admission routes1
Has abstractyes

Explore more

Same venuebioRxiv (Cold Spring Harbor Laboratory)→Same topicGenetic diversity and population structure→French-language works237,207→