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Record W3044509517 · doi:10.1101/2020.07.22.20157263

The best COVID-19 predictor is recent smell loss: a cross-sectional study

2020· preprint· en· W3044509517 on OpenAlexaff
Richard C. Gerkin, Kathrin Ohla, Maria G. Veldhuizen, Paule V. Joseph, Christine E Kelly, Alyssa J. Bakke, Kimberley E. Steele, Michael C. Farruggia, Marta Yanina Pepino, Cédric Bouysset, Graciela M Soler, Veronica Pereda‐Loth, Michele Dibattista, Keiland W Cooper, Ilja Croijmans, Antonella Di Pizio, Mehmet Hakan Özdener, Alexander Wieck Fjældstad, Cailu Lin, Mari Sandell, Preet Bano Singh, Shannon B. Olsson, Luís R. Saraiva, Gaurav Ahuja, Mohammed K Alwashahi, Surabhi Bhutani, Marco Aurélio Fornazieri, Jérôme Golebiowski, Liang‐Dar Hwang, Lina Öztürk, E. Roura, Sara Spinelli, Katherine L. Whitcroft, Farhoud Faraji, Florian Ph. S. Fischmeister, Thomas Heinbockel, Julien Wen Hsieh, Caroline Huart, Iordanis Konstantinidis, Anna Menini, Gabriella Morini, Jonas Olofsson, Carl Philpott, Denis Pierron, Vonnie D. C. Shields, Vera V. Voznessenskaya, Javier Albayay, Aytuğ Altundağ, Moustafa Bensafi, María Adelaida Bock, Orietta Calcinoni, William Fredborg, Christophe Laudamiel, Juyun Lim, Johan N. Lundström, Alberto Macchi, Pablo Meyer, Shima T. Moein, Enrique Santamaría, Debarka Sengupta, Paloma Rohlfs Domínguez, Hüseyin Yanık, Thomas Hummel, John E. Hayes, Danielle R. Reed, Masha Y. Niv, Steven D. Munger, Valentina Parma

Bibliographic record

VenuemedRxiv · 2020
Typepreprint
Languageen
FieldNeuroscience
TopicOlfactory and Sensory Function Studies
Canadian institutionsSt. Thomas HospitalUniversité du Québec à Trois-Rivières
FundersNational Institute of Neurological Disorders and StrokeNational Institutes of HealthImperial College LondonUniversity of PennsylvaniaNational Institute on Deafness and Other Communication DisordersNational Institute of Nursing ResearchPennsylvania State University
KeywordsHyposmiaAnosmiaMedicineVisual analogue scaleCross-sectional studyLogistic regressionCoronavirus disease 2019 (COVID-19)Subclinical infectionAudiologySeverity of illnessOlfactionOdorInternal medicinePsychologyPhysical therapyDiseasePathology

Abstract

fetched live from OpenAlex

BACKGROUND: COVID-19 has heterogeneous manifestations, though one of the most common symptoms is a sudden loss of smell (anosmia or hyposmia). We investigated whether olfactory loss is a reliable predictor of COVID-19. METHODS: This preregistered, cross-sectional study used a crowdsourced questionnaire in 23 languages to assess symptoms in individuals self-reporting recent respiratory illness. We quantified changes in chemosensory abilities during the course of the respiratory illness using 0-100 visual analog scales (VAS) for participants reporting a positive (C19+; n=4148) or negative (C19-; n=546) COVID-19 laboratory test outcome. Logistic regression models identified singular and cumulative predictors of COVID-19 status and post-COVID-19 olfactory recovery. RESULTS: Both C19+ and C19- groups exhibited smell loss, but it was significantly larger in C19+ participants (mean±SD, C19+: -82.5±27.2 points; C19-: -59.8±37.7). Smell loss during illness was the best predictor of COVID-19 in both single and cumulative feature models (ROC AUC=0.72), with additional features providing no significant model improvement. VAS ratings of smell loss were more predictive than binary chemosensory yes/no-questions or other cardinal symptoms, such as fever or cough. Olfactory recovery within 40 days was reported for ~50% of participants and was best predicted by time since illness onset. CONCLUSIONS: As smell loss is the best predictor of COVID-19, we developed the ODoR-19 tool, a 0-10 scale to screen for recent olfactory loss. Numeric ratings ≤2 indicate high odds of symptomatic COVID-19 (10<OR<4), especially when viral lab tests are impractical or unavailable.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.005
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Science and technology studies, Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.550
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.005
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0020.001
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.307
GPT teacher head0.369
Teacher spread0.062 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations37
Published2020
Admission routes1
Has abstractyes

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