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Record W3049250784 · doi:10.1139/cjfas-2020-0166

Improved estimation of age composition by accounting for spatiotemporal variability in somatic growth

2020· article· en· W3049250784 on OpenAlexvenueno aff
Giancarlo M. Correa, Lorenzo Ciannelli, Lewis A. K. Barnett, Stan Kotwicki, Claudio Fuentes

Bibliographic record

VenueCanadian Journal of Fisheries and Aquatic Sciences · 2020
Typearticle
Languageen
FieldEnvironmental Science
TopicMarine and fisheries research
Canadian institutionsnot available
FundersAlaska Fisheries Science CenterNational Oceanic and Atmospheric Administration
KeywordsStock assessmentStatisticsStock (firearms)GadusPopulationBiologyAge structureMathematicsEnvironmental scienceEcologyFisheryGeographyDemographyFish <Actinopterygii>Fishing

Abstract

fetched live from OpenAlex

Age composition is defined as the proportion of a fish population belonging to each age class and is an informative input to stock assessment models. Variations in somatic growth rates may lead to larger errors in age composition estimates. To reduce this source of error, we compared the performance of four methods for estimating age compositions of a simulated fish population: two methods based on age–length keys (ALK, pooled and annual) and two model-based approaches (generalized additive models (GAMs) and continuation ratio logits (CRLs)). CRL was the most robust and precise method, followed by annual ALKs, particularly when significant growth variability was present. We applied these methods to survey age subsample data for Pacific cod (Gadus macrocephalus) in the eastern Bering Sea, estimating age compositions that were then incorporated in its stock assessment model. The model that included age compositions estimated by CRL displayed the highest consistency with other data in the model. CRL approach has utility for estimating age compositions employed in stock assessment models, especially when substantial variation in somatic growth is present.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.008
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.018
Threshold uncertainty score0.036

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.008
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.233
Teacher spread0.214 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2020
Admission routes1
Has abstractyes

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