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Validation of a diffeomorphic registration algorithm using true deformation computed from thin plate spline interpolation

2020· article· en· W3081927078 on OpenAlexafffund
Deepa Krishnaswamy, Michelle Noga, Kumaradevan Punithakumar

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldComputer Science
TopicMedical Image Segmentation Techniques
Canadian institutionsUniversity of Alberta
FundersCanadian Institutes of Health Research
KeywordsImage registrationDiffeomorphismArtificial intelligenceSpline (mechanical)AlgorithmComputer scienceInterpolation (computer graphics)Thin plate splineComputer visionMathematicsSpline interpolationImage (mathematics)Mathematical analysisPhysics

Abstract

fetched live from OpenAlex

Despite the inter and intraobserver variabilities, manual contours are commonly used as surrogates for ground truth in the validation process for nonrigid medical image registration. In contrast, this study proposes the use of thin plate spline interpolation to create a true deformation field. A diffeomorphic registration method was compared to the true deformation field along with three other algorithms and was evaluated on simulated cardiac motion deformation over 10 subjects from the Automated Cardiac Diagnosis Challenge (ACDC) dataset. Two sequential registration approaches were undertaken: with respect to the first frame, and with respect to the previous frame. The Dice score was calculated between the simulated and warped contours for the two approaches: diffeomorphic registration method =0.991 and 0.997, RealTITracker (L2L2method) = 0.971 and 0.977, RealTITracker (L2L1method) = 0.975 and 0.978, and Elastix = 0.976 and 0.994. The results demonstrate the robust performance of the diffeomorphic registration method.Clinical relevance This establishes a validation of a registration method that can be used for segmentation of chambers of the heart.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.012
metaresearch head score (Gemma)0.026
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.012
Threshold uncertainty score0.066

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0120.026
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0010.001
Scholarly communication0.0020.001
Open science0.0010.002
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.042
GPT teacher head0.283
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2020
Admission routes2
Has abstractyes

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