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Record W3083565313 · doi:10.1002/lary.29060

Genotype–Phenotype Correlation of Tracheal Cartilaginous Sleeves and <i>Fgfr2</i> Mutations in Mice

2020· article· en· W3083565313 on OpenAlexaff
Austin S. Lam, C. Carrie Liu, Gail Deutsch, Joshua Rivera, Jonathan A. Perkins, Greg Holmes, Ethylin Wang Jabs, Michael L. Cunningham, John P. Dahl

Bibliographic record

VenueThe Laryngoscope · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCraniofacial Disorders and Treatments
Canadian institutionsUniversity of Calgary
FundersEunice Kennedy Shriver National Institute of Child Health and Human DevelopmentNational Institute of Child Health and Human DevelopmentNational Institute of Dental and Craniofacial ResearchNational Institute on Deafness and Other Communication Disorders
KeywordsCartilagePathologyFibroblast growth factor receptor 2BiologyPhenotypeAnatomyAndrologyFibroblast growth factorMedicineGeneticsGeneReceptor

Abstract

fetched live from OpenAlex

Objectives To characterize tracheal cartilage morphology in mouse models of fibroblast growth factor receptor ( Fgfr2 )‐related craniosynostosis syndromes. To establish relationships between specific Fgfr2 mutations and tracheal cartilaginous sleeve (TCS) phenotypes in these mouse models. Methods Postnatal day 0 knock‐in mouse lines with disease‐specific genetic variations in the Fgfr2 gene ( Fgfr2 C342Y/C342Y , Fgfr2 C342Y/+ , Fgfr2 +/Y394C , Fgfr2 +/S252W , and Fgfr2 +/P253R ) as well as line‐specific controls were utilized. Tracheal cartilage morphology as measured by gross analyses, microcomputed tomography (μCT), and histopathology were compared using Chi‐squared and single‐factor analysis of variance statistical tests. Results A greater proportion of rings per trachea were abnormal in Fgfr2 C342Y/+ tracheas (63%) than Fgfr2 +/S252W (17%), Fgfr2 +/P253R (17%), Fgfr2 +/Y394C (12%), and controls (10%) ( P &lt; .001 for each vs. Fgfr2 C342Y/+ ). TCS segments were found only in Fgfr2 C342Y/C342Y (100%) and Fgfr2 C342Y/+ (72%) tracheas. Cricoid and first‐tracheal ring fusion was noted in all Fgfr2 C342Y/C342Y and 94% of Fgfr2 C342Y/+ samples. The Fgfr2 C342Y/C342Y and Fgfr2 C342Y/+ groups were found to have greater areas and volumes of cartilage than other lines on gross analysis and μCT. Histologic analyses confirmed TCS among the Fgfr2 C342Y/C342Y and Fgfr2 C342Y/+ groups, without appreciable differences in cartilage morphology, cell size, or density; no histologic differences were observed among other Fgfr2 lines compared to controls. Conclusion This study found TCS phenotypes only in the Fgfr2 C342Y mouse lines. These lines also had increased tracheal cartilage compared to other mutant lines and controls. These data support further study of the Fgfr2 mouse lines and the investigation of other Fgfr2 variants to better understand their role in tracheal development and TCS formation. Level of Evidence NA Laryngoscope , 131:E1349–E1356, 2021

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.717
Threshold uncertainty score0.220

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.231
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations11
Published2020
Admission routes1
Has abstractyes

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