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Record W3087265092

The ecology of Baylisascaris procyonis in Ontario, Canada

2020· dissertation· en· W3087265092 on OpenAlex
Shannon K. French

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

aboutThe title or abstract carries a Canadian signal from the geographic lexicon.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueThe Atrium (University of Guelph) · 2020
Typedissertation
Languageen
FieldAgricultural and Biological Sciences
TopicInsect Utilization and Effects
Canadian institutionsnot available
Fundersnot available
KeywordsEcologyGeographyBiology
DOInot available

Abstract

fetched live from OpenAlex

Raccoons (Procyon lotor) are a successful urban adapter species that carry numerous pathogens of public health and veterinary significance. One such pathogen is the zoonotic roundworm Baylisascaris procyonis, the larval stage of which can cause disease in >150 species of birds and mammals including humans. This thesis investigated the ecology and epidemiology of B. procyonis in Ontario. Knowing that the larval stage of the parasite can cause neurological disease in a wide variety of host species, I performed a retrospective analysis of causes of morbidity and mortality in Ontario rodents and lagomorphs to determine the impact of this parasite in the province. The most common diagnosis across all species was encephalitis consistent with neural larval migrans, and the odds of this diagnosis were significantly greater for groundhogs (Marmota monax) than other species investigated. After establishing the parasite as a common cause of mortality, I performed a literature review to identify knowledge gaps and inconsistencies regarding host and environmental risk factors associated with B. procyonis in raccoons. Using a data set of 1539 raccoons submitted to the Canadian Wildlife Health Cooperative between 2013 and 2016, I investigated the influence of host factors, human population size, and predominate human land use type on B. procyonis infection in raccoons, finding previously reported associations and several interactions between variables. I then used spatial, temporal, and spatio-temporal scan statistics to identify regions and time periods with high or low clusters of infection prevalence, identifying a spatial and space-time cluster that included a portion of the greater Toronto area. With this knowledge, I performed an additional risk factor analysis using raccoons submitted to the Canadian Wildlife Health Cooperative from Toronto examining specific environmental factors and their association with infection prevalence. Many identified relationships were non-linear or involved interactions with host factors, emphasizing the complexity of host-pathogen-environment relationships. This thesis adds to the current understanding of the ecology of B. procyonis, particularly with respect to the influence of environmental factors on infection. It also demonstrates an approach to investigating environmental factors at multiple scales which can be applied to other host pathogen systems.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.824
Threshold uncertainty score0.435

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.176
Teacher spread0.166 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it