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Record W3088359255 · doi:10.1002/admt.202000575

On‐Chip Rotation of <i>Caenorhabditis elegans</i> Using Microfluidic Vortices

2020· article· en· W3088359255 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueAdvanced Materials Technologies · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetics, Aging, and Longevity in Model Organisms
Canadian institutionsMcGill UniversityUniversity of TorontoUniversity of New Brunswick
FundersCanadian Institutes of Health ResearchUniversity of TorontoState Key Laboratory of Robotics and SystemHarbin Institute of Technology
KeywordsMicrofluidicsCaenorhabditis elegansMicroscale chemistryMicrochannelConfocalRotation (mathematics)FluidicsBiological systemMicrofluidic chipMaterials scienceControllabilityMicroscopeFluorescence microscopeNanotechnologyFluorescenceComputer scienceOpticsBiologyPhysicsArtificial intelligenceEngineering

Abstract

fetched live from OpenAlex

Abstract Precise and controllable rotation of small biological samples is essential to many biological and medical applications. This paper reports, an easy‐to‐use microfluidic device to rotate single nematode worm Caenorhabditis elegans in a reliable and controllable fashion, which was enabled by on‐chip generation of stable microscale vortices inside a worm‐loaded microchannel by fluidic shear stress. To test the capability of the proposed device, single worms were successfully rotated in continuous and stepwise modes. Using this device, clear visualization of all dopaminergic neurons in the head of a C. elegans was demonstrated by capturing fluorescence images of the worm body at several rotational angles. Multiple perspectives of individual neurons of a multi‐color fluorescent transgenic worm were also obtained at high resolution using laser‐scanning confocal microscopy. The results show that this microfluidic rotation device provides a simple solution to overcoming limitations of confocal microscopy when imaging relatively thick tissue samples such as an adult C. elegans , and is compatible with multiple fluorescent proteins with different spectral properties. With its controllability, precision, and simplicity in fabrication and operation, this microfluidic device has important utility in model organism studies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.734

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.240
Teacher spread0.227 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it