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Record W3090589826 · doi:10.1002/edn3.139

Hidden introductions of freshwater red algae via the aquarium trade exposed by DNA barcodes

2020· article· en· W3090589826 on OpenAlexaff
Shing H. Zhan, Tsai‐Yin Hsieh, L. S. Yeh, Ting‐Chun Kuo, Shoichiro Suda, Shao‐Lun Liu

Bibliographic record

VenueEnvironmental DNA · 2020
Typearticle
Languageen
FieldEnvironmental Science
TopicEnvironmental DNA in Biodiversity Studies
Canadian institutionsUniversity of British Columbia
FundersMinistry of Science and Technology, Taiwan
KeywordsDNA barcodingBiodiversityBiologyAlgaeFreshwater ecosystemEcologyAquatic ecosystemFisheryEcosystemGeography

Abstract

fetched live from OpenAlex

Abstract The global aquarium trade can introduce non‐native invasive freshwater organisms, which can impact local aquatic ecosystems and their biodiversity. It is unassessed whether the aquarium trade spreads freshwater red macroalgae that hitchhike on ornamental aquatic plants and animals. We investigated this via a broad biodiversity survey and genetic analysis of freshwater red algae in the field and aquarium shops in East Asia. Using rbc L‐based DNA barcoding, we surveyed 125 samples from 46 field sites and 88 samples from 53 aquarium shops (213 samples in total) mostly across Taiwan—a key hub in the global aquarium trade—as well as in Hong Kong, Okinawa (Japan), the Philippines, and Thailand. We augmented our rbc L sequences with GenBank rbc L sequences that represent 40 additional countries globally. We found 26 molecular operational taxonomic units (mOTUs), some of which are cryptic, in Taiwan. Phylogeographical analysis revealed three potential introduced mOTUs, which exhibit no local genetic variation in Taiwan and are distributed across continents. Also, we posit that aquaria may serve as an unintentional ex situ conservation site for freshwater red algae that are vulnerable to water pollution due to anthropogenic disturbances. Collectively, these data suggest that freshwater red algae have been hitchhiking and dispersed via the aquarium trade, an important and overlooked mechanism of introduction of the organisms across the globe.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.237
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.002
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0070.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.175
Teacher spread0.165 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2020
Admission routes1
Has abstractyes

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