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Record W3096302934 · doi:10.14288/1.0394067

Exploring spatio-temporal patterns and environmental determinants of pediatric Inflammatory Bowel Disease in British Columbia

2020· article· en· W3096302934 on OpenAlexaboutno aff
Mielle Michaux

Bibliographic record

VenuecIRcle (University of British Columbia) · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicInflammatory Bowel Disease
Canadian institutionsnot available
Fundersnot available
KeywordsInflammatory bowel diseaseGeographyUlcerative colitisMedicineDiseasePathology

Abstract

fetched live from OpenAlex

Canada has some of the highest rates of pediatric Inflammatory Bowel Diseases (IBD), including Crohn’s disease (CD) and ulcerative colitis (UC), in the world. Environmental factors are known to be important for disease development but are not well understood. This study used two forms of analysis to examine the epidemiology and potential causes of IBD diagnosed before age 17 in the Canadian province of British Columbia from 2001 to 2016. A spatial cluster detection methodology was used to locate disease clusters of high and low incidence rates, the presence of which would highlight potential environmental risk and protective factors. Logistic regression models of case-control data were used to measure the relationship between IBD diagnosis and NO₂ air pollution, density of residential and neighborhood vegetation greenness (green spaces), vitamin D adjusted ultraviolet solar radiation, area South Asian and Jewish ethnicity, area self-identification as Aboriginal, and area social and material deprivation. The spatial distributions of IBD, CD, and UC were significantly clustered, with consistent IBD hot spots identified near the main urban centre of the province and cold spots identified in rural areas of south-eastern British Columbia. CD and UC had similar and different hot and cold spots, suggesting both shared and distinct environmental determinants. Most measured associations between variables of interest and IBD were moderate or small; as IBD is a multifactorial disease, these variables may still have a population-level effect on disease risk or interact with other risk factors and should be studied further. NO₂ air pollution was a significant risk factor for UC. Area South Asian ethnicity was only a significant risk factor in the univariate analysis, though a small and similar effect was observed in the multivariate analysis which included social and material deprivation. Ultraviolet vitamin D exposure was a protective factor for UC and IBD, especially in winter months. Area Aboriginal identity and area material deprivation (areas with lower socioeconomic status) were significant protective factors for CD, though Aboriginal identity was not significant in a multivariate analysis that included social and material deprivation. No reliable relationship was observed for greenness or area Jewish ethnicity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.025
Threshold uncertainty score0.180

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.007
Science and technology studies0.0020.000
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.168
Teacher spread0.156 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

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