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Record W3106745076 · doi:10.26565/2075-3810-2020-43-02

A Note on the Consequences of a Hot Mitochondrion: Some Recent Developments and Open Questions

2020· article· en· W3106745076 on OpenAlexafffund
Peyman Fahimi, M. Nasr, Lazaro M. A. Castanedo, Youji Cheng, Cyrus Ahmadi Toussi, Chérif F. Matta

Bibliographic record

VenueBiophysical Bulletin · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMitochondrial Function and Pathology
Canadian institutionsSaint Mary's UniversityDalhousie UniversityUniversité LavalMount Saint Vincent University
FundersNatural Sciences and Engineering Research Council of CanadaMount Saint Vincent UniversityZewail City of Science and TechnologyDalhousie UniversityUniversité Laval
KeywordsMitochondrionTerm (time)Electrochemical gradientGibbs free energyPhysicsBiophysicsThermodynamicsBiologyBiochemistryQuantum mechanics

Abstract

fetched live from OpenAlex

Background: Chrétien and co-workers (PLOS Biology. 2018;16(1):e2003992) recently suggested that the mitochondrion might possibly be hotter than its surrounding (by as much as 10°C). Objectives: To examine the validity of this claim and review the possible implications and repercussion of such a claim – if true – on some aspects of mitochondrial biochemistry and biophysics. Results: Both the chemical gradient and the electrical gradient Gibbs energy terms in the central equation of chemiosmotic theory are temperature dependent, the first explicitly and the second implicitly. A hotter mitochondrion – as claimed – would imply a 3% correction in the chemical gradient term, but we cannot estimate the corresponding effect on the electrical term at this time since the functional dependence of the voltage on the temperature is not known to the best of the authors’ knowledge. Further, if this claim is true and to the extent claimed (10°C), this may imply some heat-engine character for mitochondrial thermodynamic operation albeit this may only represent 4% at most. Conclusions: Doubts and criticisms regarding the suggestion of a hotter mitochondrion have been raised and are briefly discussed. These doubts are contrasted with some data and considerations that support the claim of a hotter mitochondrion. It is concluded that the mitochondrion is probably hotter than its environment but not to the extent claimed by Chrétien et al. and that the thermodynamic efficiency and the mode of operation of the mitochondrion as an electrochemical battery are very slightly perturbed by even the maximum claimed revision of the temperature of its operation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.013
metaresearch head score (Gemma)0.014
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Commentary · Consensus signal: none
Teacher disagreement score0.013
Threshold uncertainty score0.069

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0130.014
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0020.002
Science and technology studies0.0020.012
Scholarly communication0.0040.013
Open science0.0030.003
Research integrity0.0090.011
Insufficient payload (model declined to judge)0.0040.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.031
GPT teacher head0.273
Teacher spread0.241 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2020
Admission routes2
Has abstractyes

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