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Record W3106767046 · doi:10.1002/nbm.4455

Resolving the omega‐3 methyl resonance with long echo time magnetic resonance spectroscopy in mouse adipose tissue at 9.4 T

2020· article· en· W3106767046 on OpenAlexafffund
Clara Fallone, Anthony G. Tessier, Catherine J. Field, Atiyah Yahya

Bibliographic record

VenueNMR in Biomedicine · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMetabolomics and Mass Spectrometry Studies
Canadian institutionsUniversity of Alberta
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsAdipose tissueNuclear magnetic resonance spectroscopyNuclear magnetic resonanceChemistrySpectroscopyResonance (particle physics)In vivoOmegaAnalytical Chemistry (journal)BiologyChromatographyStereochemistryBiochemistryPhysics

Abstract

fetched live from OpenAlex

Tissue omega‐3 (ω‐3) content is biologically important to disease; however, its quantification with magnetic resonance spectroscopy in vivo is challenging due to its low concentration. In addition, the ω‐3 methyl resonance (≈ 0.98 ppm) overlaps that of the non‐ω‐3 (≈ 0.90 ppm), even at 9.4 T. We demonstrate that a Point‐RESolved Spectroscopy (PRESS) sequence with an echo time (TE) of 109 ms resolves the ω‐3 and non‐ω‐3 methyl peaks at 9.4 T. Sequence efficacy was verified on five oils with differing ω‐3 fat content; the ω‐3 content obtained correlated with that measured using 16.5 T NMR (R 2 = 0.97). The PRESS sequence was also applied to measure ω‐3 content in visceral adipose tissue of three different groups (all n = 3) of mice, each of which were fed a different 20% w/w fat diet. The fat portion of the diet consisted of low (1.4%), medium (9.0%) or high (16.4%) ω‐3 fat. The sequence was also applied to a control mouse fed a standard chow diet (5.6% w/w fat, which was 5.9% ω‐3). Gas chromatography (GC) analysis of excised tissue was performed for each mouse. The ω‐3 fat content obtained with the PRESS sequence correlated with the GC measures (R 2 = 0.96). Apparent T 2 times of methyl protons were assessed by obtaining spectra from the oils and another group of four mice (fed the high ω‐3 diet) with TE values of 109 and 399 ms. Peak areas were fit to a mono‐exponentially decaying function and the apparent T 2 values of the ω‐3 and non‐ω‐3 methyl protons were 906 ± 148 and 398 ± 78 ms, respectively, in the oils. In mice, the values were 410 ± 68 and 283 ± 57 ms for ω‐3 and non‐ω‐3 fats, respectively.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.447
Threshold uncertainty score0.757

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.245
Teacher spread0.236 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2020
Admission routes2
Has abstractyes

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