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Record W3109747353 · doi:10.1002/jwmg.21978

Integrating Genetic Data and Demographic Modeling to Facilitate Conservation of Small, Isolated Mountain Goat Populations

2020· article· en· W3109747353 on OpenAlexaff
Kevin S. White, Taal Levi, Jessica Breen, Meghan Britt, Justin Meröndun, Daria Martchenko, Yasaman N. Shakeri, Boyd Porter, Aaron B. A. Shafer

Bibliographic record

VenueJournal of Wildlife Management · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic and phenotypic traits in livestock
Canadian institutionsTrent University
Fundersnot available
KeywordsPanmixiaPopulationGenetic diversityGenetic structureEcologyBiologyConservation geneticsGeographyPopulation geneticsIsolation by distanceThreatened speciesDemographyHabitatMicrosatellite

Abstract

fetched live from OpenAlex

ABSTRACT Acquisition of field data and analytical methods needed for conservation and management of wildlife populations represent significant challenges, particularly for species that inhabit landscapes that are difficult to access or species that persist in small, isolated populations. In such instances, integrating diverse and complementary data streams, such as genetic and non‐genetic data, can advance our understanding of population dynamics and associated management implications. We examined how genetic and morphologic data can be used to articulate population structure of a low‐density, peninsular population of mountain goats (Oreamnos americanus) on the Cleveland Peninsula, Alaska, USA, and surrounding areas, 2005–2018. We then use a population demographic modeling approach to examine how the use of population structure information influences sustainable harvest quotas, as compared to a panmictic, null model. Specifically, we conducted extensive field sampling of genetic (n = 446) and morphologic (i.e., horn length, n = 371) data to characterize population structure. We conducted demographic analyses and examined harvest modeling scenarios using a sex‐ and age‐specific matrix population modeling approach. Genetic and morphologic data analyses suggested peninsular subpopulations were demographically isolated, relative to surrounding mainland populations. Specifically, genetic structuring was evident and followed an isolation‐by‐distance, stepping‐stone pattern indicating limited interchange, low effective population sizes, and reduced genetic diversity along a peninsular extremity to mainland gradient. Harvest modeling indicated that overharvest would likely occur if the panmictic, null model was used to guide harvest because the smallest genetically defined population at the peninsular extremity was too small to permit any level of sustainable harvest. Our analyses illustrate the importance of using genetic and morphologic data, in combination with demographic modeling, to quantitatively delineate population boundaries and dynamics for ensuring viability of small, isolated populations. © 2020 The Wildlife Society.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.008
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.011
Threshold uncertainty score0.023

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.008
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.081
GPT teacher head0.269
Teacher spread0.188 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations16
Published2020
Admission routes1
Has abstractyes

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