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Record W3109789870 · doi:10.1093/jas/skaa278.266

228 President Oral Presentation Pick: Milk biomarkers for determining the incidence of sub-acute ruminal acidosis

2020· article· en· W3109789870 on OpenAlexaffabout
Sharon Y Mowete, Débora Santchi, Ken Kwiatkowski, Jan C. Plaizier

Bibliographic record

VenueJournal of Animal Science · 2020
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicMilk Quality and Mastitis in Dairy Cows
Canadian institutionsUniversity of Manitoba
Fundersnot available
KeywordsLactationAnimal sciencePolyunsaturated fatty acidIncidence (geometry)AcidosisBiologyFatty acidEndocrinologyBiochemistryPregnancyMathematics

Abstract

fetched live from OpenAlex

Abstract In order to test the validity of milk amyloid A (MAA) as a biomarker for inflammation and subacute ruminal acidosis (SARA), 320 milk samples from 24 commercial dairy farms in Quebec were tested for milk amyloid A using a commercial kit. These farms were divided into low risk of SARA farms and high risk of SARA farms according to the proportions of short chain and polyunsaturated fatty acids content in the bulk tank of the farms. It was assumed that farms at risk of SARA had a lower proportion of short chain and a higher proportion of polyunsaturated fatty acids compared to farms that were not at risk of SARA. Farms were also blocked in groups of two farms by geographical location and management. Each block included an at-risk and a not-at-risk farm. On each farm, 7 early- to mid-lactation and 7 mid- to late-lactation cows were randomly selected for MAA analysis. Cows with a somatic cell count (SCC) of over 200,000 in pooled milk samples were not included. Data were analyzed using SAS Proc. Mixed with Stage of lactation and Risk of SARA as fixed factors, and Block as a random factor. The model also included somatic cell counts (SCC) and parity as a covariates. The concentrations of MAA ranged from non-detectable, i.e. below 0.1 ug/ml, to 3267.9 ug/ml with an average of 336.28 ug/ml.The effects of Block, Stage of lactation, and Risk of SARA on MAA were not significant. However, SCC and parity were significantly (P < 0.01) correlated (P < .001) with MAA with correlation coefficients of 0.34 and 0.26, respectively. The results show that measurement of MAA may be a suitable biomarker for subclinical inflammations such as subclinical mastitis, but not for the Risk of SARA.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.189
Threshold uncertainty score0.631

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.000
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0010.000
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.1890.057

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.059
GPT teacher head0.305
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes2
Has abstractyes

Explore more

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