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Record W3110881213 · doi:10.1002/jimd.12338

Cystathionine β‐synthase deficiency in the <scp>E‐HOD registry‐part</scp> I: pyridoxine responsiveness as a determinant of biochemical and clinical phenotype at diagnosis

2020· article· en· W3110881213 on OpenAlexfundno aff
Viktor Kožich, Jitka Sokolová, Andrew A. M. Morris, Markéta Pavlı́ková, Florian Gleich, Stefan Kölker, Jakub Krijt, Carlo Dionisi‐Vici, Matthias R. Baumgartner, Henk J. Blom, Martina Huemer

Bibliographic record

VenueJournal of Inherited Metabolic Disease · 2020
Typearticle
Languageen
FieldMedicine
TopicFolate and B Vitamins Research
Canadian institutionsnot available
FundersPerelman School of Medicine, University of PennsylvaniaVšeobecná Fakultní Nemocnice v PrazeCliniques Universitaires Saint-LucCentro de Investigación Biomédica en Red-Fisiopatología de la Obesidad y NutriciónVlaamse regeringAssistance publique-Hôpitaux de ParisUniversidade Federal de Minas GeraisDirectorate for Biological SciencesUniversidad de Las Palmas de Gran CanariaMinisterstvo Zdravotnictví Ceské RepublikyEuropean CommissionUniversidade Federal do Rio Grande do SulUniversidad de CantabriaHospital de Clínicas de Porto AlegreNational Taiwan University HospitalBirmingham Women's and Children's NHS Foundation TrustUniversiteit MaastrichtGentofte HospitalInstitut National de la Santé et de la Recherche MédicaleUniversidade Estadual de CampinasOspedale Pediatrico Bambino GesùUniversité de LausanneRare Disease FoundationAlder Hey Children's NHS Foundation TrustRadboud UniversiteitSwedish Orphan BiovitrumUniversity of PennsylvaniaVitafloChildren's National HospitalChildren's Hospital of PhiladelphiaNational Taiwan UniversityInstitut des maladies génétiques ImagineUniverzita Karlova v Praze
KeywordsCystathionine beta synthasePyridoxineHomocystinuriaPhenotypeMedicineGeneticsBiologyEndocrinologyBioinformaticsBiochemistryEnzymeGeneCysteineAmino acid

Abstract

fetched live from OpenAlex

Cystathionine β-synthase (CBS) deficiency has a wide clinical spectrum, ranging from neurodevelopmental problems, lens dislocation and marfanoid features in early childhood to adult onset disease with predominantly thromboembolic complications. We have analysed clinical and laboratory data at the time of diagnosis in 328 patients with CBS deficiency from the E-HOD (European network and registry for Homocystinurias and methylation Defects) registry. We developed comprehensive criteria to classify patients into four groups of pyridoxine responsivity: non-responders (NR), partial, full and extreme responders (PR, FR and ER, respectively). All groups showed overlapping concentrations of plasma total homocysteine while pyridoxine responsiveness inversely correlated with plasma/serum methionine concentrations. The FR and ER groups had a later age of onset and diagnosis and a longer diagnostic delay than NR and PR patients. Lens dislocation was common in all groups except ER but the age of dislocation increased with increasing responsiveness. Developmental delay was commonest in the NR group while no ER patient had cognitive impairment. Thromboembolism was the commonest presenting feature in ER patients, whereas it was least likely at presentation in the NR group. This probably is due to the differences in ages at presentation: all groups had a similar number of thromboembolic events per 1000 patient-years. Clinical severity of CBS deficiency depends on the degree of pyridoxine responsiveness. Therefore, a standardised pyridoxine-responsiveness test in newly diagnosed patients and a critical review of previous assessments is indispensable to ensure adequate therapy and to prevent or reduce long-term complications.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.013
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.287
Threshold uncertainty score0.995

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.013
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.045
GPT teacher head0.353
Teacher spread0.307 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations45
Published2020
Admission routes1
Has abstractyes

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