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Record W3131299813 · doi:10.21203/rs.3.rs-189660/v1

TpIRT1 is a transition metal transporter in Polish Wheat (Triticum polonicum L.) with a broad substrate specificity

2021· preprint· en· W3131299813 on OpenAlexaff
Yulin Jiang, Xing Chen, Songyue Chai, Huajin Sheng, Lina Sha, Xing Fan, Jian Zeng, Houyang Kang, Haiqin Zhang, Xue Xiao, Yonghong Zhou, Olena K. Vatamaniuk, Yi Wang

Bibliographic record

VenueResearch Square · 2021
Typepreprint
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Micronutrient Interactions and Effects
Canadian institutionsUniversity of Saskatchewan
FundersNational Institute of Food and AgricultureGuizhou UniversitySichuan Agricultural UniversityNational Natural Science Foundation of ChinaU.S. Department of Agriculture
KeywordsArabidopsisYeastProtoplastBiologyPloidyArabidopsis thalianaCommon wheatGenomeBotanyGeneticsGeneMutantChromosome

Abstract

fetched live from OpenAlex

Abstract Aims (1) Explore the metal substrate specificity of homologous TpIRT1A and TpIRT1B transporters from dwarf Polish wheat by expressing them in protoplast, yeast, and transgenic Arabidopsis ; (2) screen polymorphic residues of IRT1 homologs from tetraploid and diploid ancestral wheat species that change the substrate specificity. Methods Two IRT1 homoeologs were isolated from A ( TpIRT1A ) and B ( TpIRT1B ) genomes of a tetraploid crop, polish wheat ( Triticum polonicum ). Both of them were analysed by expressing them in yeast and Arabidopsis protoplast, respectively. Then we constructed over-expressing transgenic plants of TpIRT1B for metals property analysis in Arabidopsis. We also isolated 22 IRT1 homoeologs from tetraploid and diploid ancestral wheat species and expressed them in yeast for function analysis. Results Our data highlighted the importance of TpIRT1 in the uptake and translocation of Fe, Mn, Co, and Cd with direct implications for wheat yield potential. Both TpIRT1A and TpIRT1B were located at the plasma membrane and internal vesicles in Arabidopsis protoplasts, and responsible for Cd and Co sensitivity in yeast. The over-expression of TpIRT1B in A. thaliana increased Fe, Mn, Co, and Cd concentration in its tissues and improved plant growth under Fe, Mn, and Co deficiencies, while causing more sensitivity to Cd than wild-type plant. Functional analysis of IRT1 homoeologs from tetraploid and diploid ancestral wheat species in yeast disclosed four distinct amino acid residues in TdiIRT1B ( T. dicoccum ) and TtuIRT1B ( T. turgidum ). Altogether, these results increase the knowledge of IRT1 function in a global crop, wheat.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.793
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.002
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.050
GPT teacher head0.311
Teacher spread0.261 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2021
Admission routes1
Has abstractyes

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